CB293352
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.613e-53 Identity = 104/178 (58.43%), Postives = 132/178 (74.16%), Query Frame = 3 Query: 258 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG------RVGGVVTNWALVSMNHDTQSCMDPNVM 770 D + FKF PI+ES VSR MT RY D+ +A +D GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WLGGQLFSAMV+RKPAH+FL EL I Y+++ +YVV+KHAALF ST++SK+L PNVKLFNA EDL+ + V GVVTNW LV+ H TQ CMDPNV+ Sbjct: 34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVI 211
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.138e-21 Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 3 Query: 285 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 731 ++E ++R + Y D++ + D GAG +G+ AY L+K ++AI E+ +S GGG W GG F+ +VV+ A LDE GI Y+E + + A +TI SK++ + VK+FN + EDL++K RV G+V NW V M Sbjct: 2 LREVTITRAIVESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVADAIEVATTIASKVV-KSGVKIFNMIEVEDLVIKDNRVSGIVINWTPVLM 148
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.792e-21 Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 3 Query: 285 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 731 ++E +SR + Y D++ D GAG +G+ Y L+K ++AI E+ +S GGG W G F+ +VV++ A LDE G+DY + N + + + ST+ SK + + K+FN V EDL+VK GRV G+V NW V M Sbjct: 1 MREIEISRAIVEAYFNDLLQNLQLDIAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSVGGGIWGGAMGFNRVVVQESAREILDEFGVDYSQVGNGLYVLDSIELASTLASKAV-KAGAKIFNMVEVEDLVVKDGRVSGLVINWTPVMM 147
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.792e-21 Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 285 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 731 +K+ ++SR + Y D++ + D GAG +G+ Y L+K ++AI E+ +S GGG W GG F+ +VV++ A LDE I Y+E + + A +TI SK + + VK+FN V EDL+VK RV G+V NW V M Sbjct: 2 LKDVVISRAIVESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMVEVEDLVVKDDRVSGIVINWTPVKM 148
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.220e-21 Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 285 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 731 ++E +SR + Y D++ + D GAG +G+ AY L+K ++AI E+ +S GGG W GG F+ +VV++ A LDE I Y+E + + A +TI SK + + VK+FN + EDL+VK RV G+V NW V M Sbjct: 2 LREVTISRAIIESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMIEVEDLVVKDNRVSGIVINWTPVLM 148
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 50/144 (34.72%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 285 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 716 +++ ++SR + RY + + D GAG +GL+ AYEL+KN ++A+ E+ +PGGG W GG +F+ +V+ K FL E+ I+Y+ +++++V+ + F S ++ + + +FN V+ ED+ V+ GRV GVV NW Sbjct: 3 MRDVLISRLIVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV-DSVHFASGLLYR-ATKAGAIVFNNVSVEDVAVQNGRVCGVVVNW 143
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.212e-18 Identity = 50/153 (32.68%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 273 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 731 K D IK +SR + YM D++ Y + D G G +GL+ Y L++ +++A+ E+ +S GGG W GG +F+ +VV+ LDE GI + D + + TST+ S+ + +K+FN ++ ED++++ + G+V NW+ V M Sbjct: 2 KLDDIK---ISRAIVEGYMEDLLDYMEMDVAIGGGGPSGLTAGYYLAR-AGLKVALFERKLSIGGGMWGGGMMFNKIVVQDEGREILDEFGIRSEPYDEGYHVADSVEATSTLCSR-ACQAGLKIFNLMSIEDVMIRDEGITGLVLNWSSVEM 149
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.868e-16 Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 3 Query: 285 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSM 731 + E +SR + +I + + D G G +GL+CA L + ++ A+IE+ +S GGG W GG +F +VV++ A LD GI Y ++ Y V K ++ V+ FN ED++++G GR+GG+V NW V M Sbjct: 3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM 150
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 276 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDP 761 F E+ V+R +TR++ + + +TD G G +GL A EL+ ++ + IIE++ GGG WLGG L + + VR PA LD+LG+ +YDE+++ + + A S +++ ++ N D++V+ V G V NW V +C+DP Sbjct: 6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDP 168
BLAST of CB293352 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 276 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDP 761 F E+ V+R +TR++ + + +TD G G +GL A EL+ ++ + IIE++ GGG WLGG L + + VR PA LD+LG+ +YDE+++ + + A S +++ ++ N D++V+ V G V NW V +C+DP Sbjct: 6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDP 168 The following BLAST results are available for this feature:
BLAST of CB293352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293352 ID=CB293352; Name=CB293352; organism=Citrus sinensis; type=EST; length=771bpback to top |