CB293386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP4_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.016e-27 Identity = 76/210 (36.19%), Postives = 119/210 (56.67%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGILSSVKST--TRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQI-KLGFIAGLVPREKSMSFERMLFRATRGNVFLR 767 +FRSE M L Q+ + +E+A+ V+ LGELGL+QFKDLN + FQR + ++++C + R LRF +++M ++ ++ + T LE L LE EL E N N L+++ EL E K +L+K +FF + A + ++ T + E+ A P+ KLGFIAG++ RE+ SFER+L+R RGNV+L+ Sbjct: 4 VFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVRRCESLERILRFLEDEMQNEIVVQLLEKSPLTPLPREMITLETVLEKLEGELQEANQNQQALKQSFLELTELKYLLKKTQDFFETETNLA----DDFFTEDTSGLL---------ELKAVPAYMTGKLGFIAGVINRERMASFERLLWRICRGNVYLK 200
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP4_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.469e-26 Identity = 74/219 (33.79%), Postives = 114/219 (52.05%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGILS--SVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSAL----------TSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLR 767 +FRSE M L Q+ + +E+A+ V+ LGELGL+QFKDLN+ + FQR + ++++C + R LRF +++M ++ + T LE L LE EL E N + L+++ EL E K +L+K +FF + TS + R + + TG KLGF AG++ RE+ SFER+L+R RGNV+L+ Sbjct: 4 VFRSEEMCLSQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVRRCESLERILRFLEDEMQNEILIQVPEKDAETPLPREMITLETTLEKLEGELQEANQSHQALKKSFLELTELKYLLKKTQDFFETETNLGEDFFVEDTSGLLELRTIPAFMTG----------------------KLGFTAGVINRERMASFERLLWRVCRGNVYLK 200
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPH1_NEUCR (V-type proton ATPase subunit a OS=Neurospora crassa GN=vph-1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.218e-25 Identity = 75/222 (33.78%), Postives = 117/222 (52.70%), Query Frame = 3 Query: 150 FRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGILSSVKS------TTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEM---SADPSKQ---IKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQAVV 779 FRS M +VQ+ I E + LGELGL+ F+DLNSE S FQR + I++ + R+LR+F QM KAGI T D+L + LE + +N + + L++ EL E++ VL++AG FF A +E + + PLL D E +AD + + +GF+AG++ R++ +FER+L+R RGN+++ QA + Sbjct: 9 FRSADMSMVQLYISNEIGREVCNALGELGLVHFRDLNSELSAFQRAFTQDIRRLDNVERQLRYFHSQMEKAGIPLRKFDPDVDILTPPTTTEIDELAERAQTLEQRVSSLNESYETLKKREVELTEWRWVLREAGGFFDRA-------HGNVEEIRASTDNDDAPLLQDVEQHNTAADVERSFSGMNIGFVAGVIGRDRVDAFERILWRTLRGNLYMNQAEI 223
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP2_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus GN=Atp6v0a2 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.281e-21 Identity = 72/215 (33.49%), Postives = 117/215 (54.42%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGI-LSSVKSTTRAD--NNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEM---SADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQA 773 LFRSE M L Q+ + +A+ +S LGE GL+QF+DLN S FQR + ++K+C E+ R L + +++ +A I L +++ A + +++ +L LE EL E+ N +KL++ ELVEY +L+ F +R +E + T E E P L + + S KLGF++GL+ + + +FERML+RA +G + A Sbjct: 4 LFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELERILVYLVQEITRADIPLPEGEASPPAPPLKHVLEMQEQLQKLEVELREVTKNKEKLRKNLLELVEYTHMLRVTKTFL----------KRNVEFEPTYE---EFPALENDSLLDYSCMQRLGAKLGFVSGLIQQGRVEAFERMLWRACKGYTIVTYA 205
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP3_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens GN=TCIRG1 PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 5.317e-20 Identity = 65/205 (31.71%), Postives = 108/205 (52.68%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAG-ILSSVKSTTRADNNTDDLEV--KLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRG 752 +FRSE + LVQ+ +P +A+ VS LGELGL++F+DLN+ S FQR + +++C E+ + F +E++ +AG +L K A D L + + L EL ++ N L+ +L + VL++ E +A + A +R TPLL + P + +++ F+AG V K+ + ER+L+RA RG Sbjct: 4 MFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRDLNASVSAFQRRFVVDVRRCEELEKTFTFLQEEVRRAGLVLPPPKGRLPAPPPRDLLRIQEETERLAQELRDVRGNQQALRAQLHQLQLHAAVLRQGHEPQLAAAHTDGASER-------------TPLL---QAPGGPHQDLRVNFVAGAVEPHKAPALERLLWRACRG 192
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP2_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens GN=ATP6V0A2 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.944e-20 Identity = 72/214 (33.64%), Postives = 116/214 (54.21%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGI-LSSVKSTTRADNNTDDLEV--KLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGE--MTIETPLLTDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQA 773 LFRSE M L Q+ + +A+ +S LGE GL+QF+DLN S FQR + ++K+C E+ R L + +++ +A I L +++ A LE+ +L LE EL E+ N +KL++ EL+EY +L+ F +R +E + T E ++E+ L D S KLGF++GL+ + K +FE+ML+R +G + A Sbjct: 4 LFRSETMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELERILVYLVQEINRADIPLPEGEASPPAPPLKQVLEMQEQLQKLEVELREVTKNKEKLRKNLLELIEYTHMLRVTKTFV----------KRNVEFEPTYEEFPSLESDSLLD--YSCMQRLGAKLGFVSGLINQGKVEAFEKMLWRVCKGYTIVSYA 205
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPP2_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus GN=ATP6V0A2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.185e-19 Identity = 68/215 (31.63%), Postives = 113/215 (52.56%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGILSSVKSTTRAD---NNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEM---SADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQA 773 LFRSE M L Q+ + +A+ +S LGE GL++F+DLN S FQR + ++K+C E+ R L + +++ +A I T+ +++ +L LE EL E+ N +KL++ EL+EY +L+ F +R +E + T E E P L ++ + S KLGF++GL+ + K +FE+ML+R +G + A Sbjct: 4 LFRSETMCLAQLFLQSGTAYECLSVLGEKGLVEFRDLNQNVSSFQRKFVGEVKRCEELERILAYLVQEINRADIPLPEGDTSPPAPPLKQVLEMQEQLQKLEVELREVTKNKEKLRKNLLELIEYTHMLRVTKTFV----------KRNVEFEPTYE---EFPPLENESLLDYSCMQRLGAKLGFVSGLINQGKVEAFEKMLWRVCKGYTIVTYA 205
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPH1_YEAST (V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces cerevisiae GN=VPH1 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16 Identity = 59/224 (26.34%), Postives = 105/224 (46.88%), Query Frame = 3 Query: 147 LFRSEPMQLVQIIIPIESAHLTVSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGILSSVKSTTR------------ADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQTGEMTIETPLLTDKEMSADPSK-----QIKLGFIAGLVPREKSMSFERMLFRATRGNVFLR 767 +FRS M LVQ IP E + + LG+LGL+QF+DLNS+ FQRT+ +I++ + R+ R+F + K I T + + + DD LE L+++ D+++ ++L +Y+ +LQ EFF G+ T T + + + A+ + ++ G++ R+K + E++L+R RGN+F + Sbjct: 8 IFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRRLDNVERQYRYFYSLLKKHDIKLYEGDTDKYLDGSGELYVPPSGSVIDDYVRNASYLEERLIQMEDATDQIEVQKNDLEQYRFILQSGDEFFLK-----------------GDNTDSTSYMDEDMIDANGENIAAAIGASVNYVTGVIARDKVATLEQILWRVLRGNLFFK 214
BLAST of CB293386 vs. ExPASy Swiss-Prot
Match: VPH1_SCHPO (V-type proton ATPase subunit a OS=Schizosaccharomyces pombe GN=vph1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.338e-14 Identity = 54/204 (26.47%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 213 VSYLGELGLLQFKDLNSEKSPFQRTYAAQIKKCAEMARKLRFFKEQMLKAGI------LSSVKSTTRADNNTDDLEVKLGDLEAELVEINANGDKLQRAHSELVEYKLVLQKAGEFFSSALTSAAAQQREMESQQ--TGEMTIETPLL----------TDKEMSADPSKQIKLGFIAGLVPREKSMSFERMLFRATRGNVFLRQ 770 +S LGEL + FKDLN + FQR++ +I++ + R LR+ ++ GI L + + +D+ ++ LEA + ++ + L+ + + +E+ VL KA FFS + + + E+ +GE PL+ T P L F++G++P K ER+L+R RGN+F+ Q Sbjct: 1 MSALGELSTIHFKDLNPDVVAFQRSFVREIRRLTDTERLLRYLHSEIDLNGIHVPDHNLPPSYESVLESSTIEDIIERITRLEARVRQLVESSQLLEARYLQQLEFANVLTKADAFFSKSGNTVDPLRNNYETSSIFSGEDDTTAPLIENALELGTTGTFDSEETSPQMNTTLDFVSGIIPTVKFQFLERILWRTLRGNLFIHQ 204 The following BLAST results are available for this feature:
BLAST of CB293386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293386 ID=CB293386; Name=CB293386; organism=Citrus sinensis; type=EST; length=781bpback to top |