CB293393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: NFYC_DICDI (Nuclear transcription factor Y subunit gamma OS=Dictyostelium discoideum GN=nfyc-1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.490e-30 Identity = 59/96 (61.46%), Postives = 79/96 (82.29%), Query Frame = 1 Query: 505 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 792 SFW++Q ++I K DFK H LPLARIKKIMK+D+DV IS+EAP++FA+ACE+ ILE+T RSW HTE NKRRTLQ+ DI +++R + FDFL+D++ Sbjct: 251 SFWSSQLRDIHKTEDFKTHELPLARIKKIMKSDKDVNKISSEAPILFAKACEILILEMTHRSWVHTEMNKRRTLQRTDIINSLSRCETFDFLIDML 346
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: HAP5_YEAST (Transcriptional activator HAP5 OS=Saccharomyces cerevisiae GN=HAP5 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.228e-29 Identity = 62/103 (60.19%), Postives = 78/103 (75.73%), Query Frame = 1 Query: 508 FWANQYQEIEKVN--------DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 792 +W EIE N DFK+HSLP ARI+K+MK DEDV+MISAEAP+IFA+ACE+FI ELT+R+W E NKRRTLQK DIA A+ ++D+FDFL+D+V Sbjct: 133 YWQELINEIESTNEPGSEHQDDFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKSDMFDFLIDVV 235
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.218e-28 Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = 1 Query: 505 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 792 ++W Q +E V+DFKN LPLARIKKIMKAD DV M+SAEAP+IFA+ACEMFI++LT+RSW EENKR TLQK+DI+ A+ + +DFL+D+V Sbjct: 38 NYWIEQ---METVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVV 130
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: NFYC8_ARATH (Nuclear transcription factor Y subunit C-8 OS=Arabidopsis thaliana GN=NFYC8 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.763e-26 Identity = 55/94 (58.51%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 505 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVD 786 SFW+ +E+E DFKNH LP+ RIKKIMK D DV MI++EAP++ ++ACEMFI++LT+RSW H +E+KR TLQK+++ AA+ +T IFDFL+D Sbjct: 20 SFWS---KEMEGNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD 110
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: HAP5_SCHPO (Transcriptional activator hap5 OS=Schizosaccharomyces pombe GN=hap5 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.234e-21 Identity = 49/98 (50.00%), Postives = 74/98 (75.51%), Query Frame = 1 Query: 508 FWANQYQEIEKVND-FKNHSLPLARIKKIMKADEDVR--MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 792 +W +E + K LPLARIKK+MK D+DV+ MISAEAP +FA+ E+FI ELT+R+W H ++N+RRTLQ++DIA A+++++++DFL+DI+ Sbjct: 89 YWQKTIDTLEHDDQAVKTLHLPLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTMRAWLHAKKNQRRTLQRSDIANAVSKSEMYDFLIDII 186
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: NFYC5_ARATH (Nuclear transcription factor Y subunit C-5 OS=Arabidopsis thaliana GN=NFYC5 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.810e-21 Identity = 48/96 (50.00%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 505 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 792 SFW+ + +E + KNH P++RIK+IMK D DV MI+AEAP + ++ACEMF+++LT+RSW H +E+ R T++K+D+ A +++T IFDFL D V Sbjct: 20 SFWS---KGMEGDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDV 112
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: NFYC7_ARATH (Nuclear transcription factor Y subunit C-7 OS=Arabidopsis thaliana GN=NFYC7 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.566e-19 Identity = 49/102 (48.04%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 505 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQ------KNDIAAAITRTDIFDFLVDIV 792 ++W Q + D K+H+ PL RIKKIMK++ +V M++AEAPV+ ++ACEM IL+LT+RSW HT E R+TL+ ++DI+AA TR+ F FL D+V Sbjct: 47 NYWIAQ---MGNATDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVV 145
BLAST of CB293393 vs. ExPASy Swiss-Prot
Match: NFYCA_ARATH (Nuclear transcription factor Y subunit C-10 OS=Arabidopsis thaliana GN=NFYC10 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.556e-17 Identity = 42/96 (43.75%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 508 FWANQYQEIEKVNDFKNHS-LPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 792 FW NQ E++ +F + LPL+R++KI+K+D +V+ IS + P +F++ACE FILE+TLR+W HT+ R T+++ DI A+ + +DFL+D V Sbjct: 51 FWNNQR---EQLGNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRV 143 The following BLAST results are available for this feature:
BLAST of CB293393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293393 ID=CB293393; Name=CB293393; organism=Citrus sinensis; type=EST; length=794bpback to top |