CB293396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11 Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = -1 Query: 320 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL----TDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMM-MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 769 +Y ++ +TRLA +K G Q+ G+ D K LK++G++ Y+G+ + +GII Y G+ +Y++LK L T+ G + LASYP+ +R RM S E S F++I+K EG L++G N L+ Sbjct: 298 IYPMEVLKTRLA-----LRKTG--QYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALIRTRMQAQASVEGSSQVSMTGLFKQIMKTEGPTGLYRGLTPNFLK 445
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Solute carrier family 25 member 42 OS=Danio rerio GN=slc25a42 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.013e-11 Identity = 46/149 (30.87%), Postives = 71/149 (47.65%), Query Frame = -1 Query: 329 YSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIG--AGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEG-TKSLFKGAGAN 766 Y LD R R+A K ++ ++DV+ + + +G+ LYRGF+ + +G++ Y GL F Y++LK + L +G G ASYP+D VRRRM Y + L +EI+ EG + L+KG N Sbjct: 152 YPLDMVRARMAVTPK-------EMYSNIMDVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFTYETLKKTHAEKTGRAHPFPYERLVFGACAGLIGQSASYPLDVVRRRMQTAGVTGHTYSTVLGTMREIVAEEGIVRGLYKGLSMN 293
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: MCFJ_DICDI (Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum GN=mcfJ PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11 Identity = 50/157 (31.85%), Postives = 72/157 (45.86%), Query Frame = -1 Query: 320 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL---TDGMQDSFLASFLLGWGITIGAGLAS---YPIDTVRRRMMMT-SGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 769 ++ LD RTRL Q+NG D +KK ++ +G LY+GF S G + R +YFG Y+ +K L +D D + + G I LAS P D + + + S KYK F++I G K L+KG GA I+R Sbjct: 46 MFPLDVIRTRLQVQGSQNVIQSFPQYNGTFDGFKKLIRLEGKRALYKGFLTSECGYLCSRAIYFGSYEFVKQGFLKGRSDSDSDLLFVTTISG---AISEALASVIWVPFDVATQSVQIQGSLSKPKYKGGSDVFKKIYGERGIKGLYKGFGATIIR 199
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11 Identity = 45/155 (29.03%), Postives = 74/155 (47.74%), Query Frame = -1 Query: 320 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL----TDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMM-MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 769 +Y ++ +TRLA G Q++G+ D KK ++ +G+ Y+G+ + +GII Y G+ +Y++LK L TD L G + LASYP+ +R RM S E + F++I+ EG L++G N L+ Sbjct: 305 IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANPGVLVLLGCGTASSTCGQLASYPLALIRTRMQAQASIEGAPQLNMGGLFRKIVAKEGFFGLYRGIAPNFLK 452
BLAST of CB293396 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11 Identity = 45/155 (29.03%), Postives = 74/155 (47.74%), Query Frame = -1 Query: 320 VYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL----TDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMM-TSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 769 +Y ++ +TR+A +K G Q+ G++D KK L +G++ Y+G+ + +GII Y G+ +Y++LK L T G + LASYP+ VR RM S E + F+ I+K EG L++G N ++ Sbjct: 342 IYPMEVLKTRMA-----LRKTG--QYQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAEASVEGAPQMTMSKLFKHIVKTEGAFGLYRGLAPNFMK 489 The following BLAST results are available for this feature:
BLAST of CB293396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293396 ID=CB293396; Name=CB293396; organism=Citrus sinensis; type=EST; length=853bpback to top |