CB293397

Overview
NameCB293397
Unique NameCB293397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1975 contig Csv1_Contig1975:19..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 6.553e-71
Identity = 129/189 (68.25%), Postives = 151/189 (79.89%), Query Frame = 3
Query:  204 TGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            T  A  +  +P+     +E   S+F  DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMI++GRLSH YKGI +CF RT  +EG++SLWRGNTANV+RYFPTQALNFAFKD FK++F +KK+RDGY KWFAGN             FVYSLDYARTRLANDAK+AKKGGERQFNGL+DVY+KT +SDG+
Sbjct:    3 TSSAAAAASTPVNANTITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.044e-68
Identity = 122/165 (73.94%), Postives = 138/165 (83.64%), Query Frame = 3
Query:  276 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            F+ DFLMGGVSAAVSKTAAAPIER+KLL+QNQDEMI++GRL   Y GI DCF RT  DEG+++LWRGNTANVIRYFPTQALNFAF+D FK++F +KKD DGYWKW AGN             FVYSLDYARTRLANDAK+AKKGGERQFNGL+DVY+KT+ SDGI
Sbjct:   13 FVADFLMGGVSAAVSKTAAAPIERIKLLVQNQDEMIRAGRLDRRYNGIIDCFKRTTADEGVMALWRGNTANVIRYFPTQALNFAFRDKFKKMFGYKKDVDGYWKWMAGNLASGGAAGATSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTIASDGI 177          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.741e-67
Identity = 127/171 (74.27%), Postives = 142/171 (83.04%), Query Frame = 3
Query:  261 KSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVYKKTLKSDGI 770
            K   +F+VDFL GG+SAAVSKTAAAPIERVKLLIQNQDEMIK GRL+ PYKGI +CF RTV++EG  SLWRGNTANVIRYFPTQALNFAFKD FKR+F F KD++ YWKWFAGN             FVYSLDYARTRLANDAK+AKK GG+RQFNGL+DVY+KT+ SDGI
Sbjct:    3 KEEKNFMVDFLAGGLSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLASPYKGIGECFVRTVREEGFGSLWRGNTANVIRYFPTQALNFAFKDKFKRMFGFNKDKE-YWKWFAGNMASGGAAGAVSLSFVYSLDYARTRLANDAKSAKKGGGDRQFNGLVDVYRKTIASDGI 172          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 9.166e-65
Identity = 123/174 (70.69%), Postives = 138/174 (79.31%), Query Frame = 3
Query:  249 APSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            AP+ K  S+FL+DFLMGGVSAAV+KTAA+PIERVKLLIQNQDEM+K G L   Y GI DCF RT   EG++S WRGNTANVIRYFPTQALNFAFKD  K +F FKK+ +GY KWFAGN             FVYSLDYARTRLA D+K++KKGG RQFNGLIDVYKKTLKSDG+
Sbjct:   14 APAPKKESNFLIDFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKE-EGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADSKSSKKGGARQFNGLIDVYKKTLKSDGV 186          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.667e-64
Identity = 123/172 (71.51%), Postives = 136/172 (79.07%), Query Frame = 3
Query:  255 SEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            ++K  S+F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK G L   Y GI +CF RT  DEG+ S WRGNTANVIRYFPTQALNFAFKD  K +F FKK+ +GY KWFAGN             FVYSLDYARTRLA D+K+AKKGGERQFNGL+DVYKKTL SDG+
Sbjct:    3 TDKKQSNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKQGSLDRRYTGIVECFKRTAADEGVASFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKE-EGYAKWFAGNLASGGLAGGLSLLFVYSLDYARTRLAADSKSAKKGGERQFNGLVDVYKKTLASDGV 173          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.485e-62
Identity = 117/176 (66.48%), Postives = 138/176 (78.41%), Query Frame = 3
Query:  243 VQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            + + +++  ++F ++FLMGGVSAA++KTAA+PIERVK+LIQNQDEMIK G L   Y GI DCF RT K EG++S WRGNTANVIRYFPTQALNFAFKD  K +F FKK+ +GY KWFAGN             FVYSLD+ARTRLA DAK++KKGG RQFNGL DVYKKTLKSDGI
Sbjct:    1 MSSDAKQQETNFAINFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKE-EGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKSSKKGGARQFNGLTDVYKKTLKSDGI 175          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.374e-59
Identity = 112/167 (67.07%), Postives = 129/167 (77.25%), Query Frame = 3
Query:  270 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            S F VDFLMGGVSAA++KT AAPIERVKLL+QNQ+EM+K G L   YKGI DCF RT   EGI+S WRGNTANV+RYFPTQALNFAFKD  K L ++ ++RDGY KWFAGN             FVYSLDYARTRLA DA+ +K   +RQFNGL+DVYKKTLK+DG+
Sbjct:   11 SHFGVDFLMGGVSAAIAKTGAAPIERVKLLMQNQEEMLKQGSLDTRYKGILDCFKRTATHEGIVSFWRGNTANVLRYFPTQALNFAFKDKIKSLLSYDRERDGYAKWFAGNLFSGGAAGGLSLLFVYSLDYARTRLAADARGSKSTSQRQFNGLLDVYKKTLKTDGL 177          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_ANOGA (ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=AGAP006782 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.090e-41
Identity = 93/166 (56.02%), Postives = 112/166 (67.47%), Query Frame = 3
Query:  276 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            F  DFL GG+SAAVSKTA APIERVKLL+Q Q    K   +   YKGI DCF R  K++GI + WRGN ANVIRYFPTQALNFAFKD +K++F    D++  +W++F GN             FVY LD+ARTRL  D    +  GER+FNGL+D  KKT+KSDGI
Sbjct:   10 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAAS-KQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGAD--VGRGAGEREFNGLLDCLKKTVKSDGI 172          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.205e-40
Identity = 93/167 (55.69%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKSGSEREFRGLGDCLVKITKSDGI 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.574e-40
Identity = 94/167 (56.29%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKAGAEREFKGLGDCLVKIYKSDGI 170          
The following BLAST results are available for this feature:
BLAST of CB293397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
ADT_SCHPO6.553e-7168.25ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT_NEUCR3.044e-6873.94ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT_CHLRE5.741e-6774.27ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]
ADT2_YEAST9.166e-6570.69ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
ADT_KLULA2.667e-6471.51ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
ADT3_YEAST9.485e-6266.48ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]
ADT1_YEAST3.374e-5967.07ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT1_ANOGA1.090e-4156.02ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=... [more]
ADT3_BOVIN1.205e-4055.69ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT2_RAT1.574e-4056.29ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ac01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293397 ID=CB293397; Name=CB293397; organism=Citrus sinensis; type=EST; length=772bp
GCCCTTAGAGCGACCTTCTCAGGTCACCATCTTCAGCTGCAACTTTGGCA
GATGGATCGTATCCATCCGTATTTCAGAAAATGCAAGGCCAGTCATACTT
CATTTCTGGGGTCTCCCCCAATTTGTATGCCCACAACTACAGTGTGGCAG
GTTCCTTTGTTAATAGAGGATCACAGAATTCTTTTTGGGCAGCAAGTCAG
GGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCCTATATTCGTACAAGC
TCCATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGGATTTTCTCATGGGAG
GAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTGCTCCTATTGAGCGGGTT
AAGCTTTTGATTCAGAATCAAGATGAGATGATCAAGAGTGGTCGGCTCTC
GCATCCGTACAAGGGGATTTCTGATTGCTTTGGTAGAACTGTTAAGGATG
AAGGCATACTATCTCTTTGGAGAGGCAACACTGCCAATGTTATCAGATAC
TTCCCTACCCAGGCCCTGAACTTTGCATTCAAGGATTACTTTAAGAGGCT
GTTTAACTTCAAGAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGA
ACTTGGCATCTGGTGGGGCTGCTGGTGCTTCATCGCTTCTTTTTGTGTAT
TCGCTTGACTATGCAAGAACACGTTTGGCAAATGATGCTAAGGCAGCTAA
AAAGGGTGGGGAAAGGCAGTTTAATGGTTTGATTGATGTCTACAAGAAGA
CTCTGAAATCTGATGGCATTGC
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