CB293397

Overview
NameCB293397
Unique NameCB293397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1975 contig Csv1_Contig1975:19..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.574e-40
Identity = 94/167 (56.29%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKAGAEREFKGLGDCLVKIYKSDGI 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 166.392 bits (420), Expect = 1.574e-40
Identity = 94/167 (56.29%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKAGAEREFRGLGDCLVKIYKSDGI 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.574e-40
Identity = 94/167 (56.29%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKAGAEREFRGLGDCLVKIYKSDGI 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 2.685e-40
Identity = 93/167 (55.69%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SFL DFL GG++AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+ARTRLA D    K   +R+FNGL D   K  KSDG+
Sbjct:    7 SFLKDFLAGGIAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKGSSQREFNGLGDCLTKIFKSDGL 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 165.622 bits (418), Expect = 2.685e-40
Identity = 93/167 (55.69%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SFL DFL GG++AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+ARTRLA D    K   +R+FNGL D   K  KSDG+
Sbjct:    7 SFLKDFLAGGIAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKGSSQREFNGLGDCLTKIFKSDGL 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT3_HUMAN (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 164.851 bits (416), Expect = 4.581e-40
Identity = 92/167 (55.09%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGN             FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKSGTEREFRGLGDCLVKITKSDGI 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 5.983e-40
Identity = 93/167 (55.69%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIR+FPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D    K G ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRHFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKAGAEREFRGLGDCLVKIYKSDGI 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.813e-40
Identity = 93/167 (55.69%), Postives = 107/167 (64.07%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D    K G  R+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIMDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKAGDAREFKGLGDCLVKITKSDGI 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT1_HUMAN (ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 PE=1 SV=4)

HSP 1 Score: 164.081 bits (414), Expect = 7.813e-40
Identity = 94/167 (56.29%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SFL DFL GGV+AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K+LF    DR   +W++FAGN             FVY LD+ARTRLA D    K   +R+F+GL D   K  KSDG+
Sbjct:    7 SFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKGAAQREFHGLGDCIIKIFKSDGL 170          
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 2.273e-39
Identity = 91/167 (54.49%), Postives = 107/167 (64.07%), Query Frame = 3
Query:  273 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGN             FVY LD+ARTRLA D    K   ER+F GL D   K  KSDGI
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKSATEREFKGLGDCLVKITKSDGI 170          
The following BLAST results are available for this feature:
BLAST of CB293397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
ADT2_MOUSE1.574e-4056.29ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_HUMAN1.574e-4056.29ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_BOVIN1.574e-4056.29ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT1_RAT2.685e-4055.69ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_MOUSE2.685e-4055.69ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]
ADT3_HUMAN4.581e-4055.09ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]
ADT2_PONAB5.983e-4055.69ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]
ADT2_TACAC7.813e-4055.69ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
ADT1_HUMAN7.813e-4056.29ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 P... [more]
ADT3_PIG2.273e-3954.49ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ac01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293397 ID=CB293397; Name=CB293397; organism=Citrus sinensis; type=EST; length=772bp
GCCCTTAGAGCGACCTTCTCAGGTCACCATCTTCAGCTGCAACTTTGGCA
GATGGATCGTATCCATCCGTATTTCAGAAAATGCAAGGCCAGTCATACTT
CATTTCTGGGGTCTCCCCCAATTTGTATGCCCACAACTACAGTGTGGCAG
GTTCCTTTGTTAATAGAGGATCACAGAATTCTTTTTGGGCAGCAAGTCAG
GGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCCTATATTCGTACAAGC
TCCATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGGATTTTCTCATGGGAG
GAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTGCTCCTATTGAGCGGGTT
AAGCTTTTGATTCAGAATCAAGATGAGATGATCAAGAGTGGTCGGCTCTC
GCATCCGTACAAGGGGATTTCTGATTGCTTTGGTAGAACTGTTAAGGATG
AAGGCATACTATCTCTTTGGAGAGGCAACACTGCCAATGTTATCAGATAC
TTCCCTACCCAGGCCCTGAACTTTGCATTCAAGGATTACTTTAAGAGGCT
GTTTAACTTCAAGAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGA
ACTTGGCATCTGGTGGGGCTGCTGGTGCTTCATCGCTTCTTTTTGTGTAT
TCGCTTGACTATGCAAGAACACGTTTGGCAAATGATGCTAAGGCAGCTAA
AAAGGGTGGGGAAAGGCAGTTTAATGGTTTGATTGATGTCTACAAGAAGA
CTCTGAAATCTGATGGCATTGC
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