CB293397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 3 Query: 183 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770 FW S G + + F + EK + L GGV+ AVS+T+ AP++R+K+++Q KS +++ I F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D KK LK +G+ Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQVHGS--KSAKMN-----IYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFVSG----SMAGATAQTFIYPMEVLKTRLA-------VGKTGQYSGMFDCAKKILKYEGM 340
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.661e-15 Identity = 58/196 (29.59%), Postives = 95/196 (48.47%), Query Frame = 3 Query: 183 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770 FW S G + + F + EK + L GG++ AVS+T+ AP++R+K+++Q KS +++ I F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D KK LK +G+ Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKIMMQVHGS--KSDKMN-----IFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFISG----SMAGATAQTFIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKHEGL 340
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14 Identity = 58/195 (29.74%), Postives = 94/195 (48.21%), Query Frame = 3 Query: 183 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDG 767 FW S G + + F + EK + L GGV+ AVS+T+ AP++R+K+++Q + + + + G F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA AK G Q++G+ KK LK +G Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQ-----VHGSKSMNIFGG----FRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERFISG----SMAGATAQTFIYPMEVLKTRLA----VAKTG---QYSGIYGCAKKILKHEG 337
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13 Identity = 53/195 (27.18%), Postives = 93/195 (47.69%), Query Frame = 3 Query: 183 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDG 767 FW S G + + F + E+ + L GG++ AVS+T+ AP++R+K+++Q + + + + G F + +K+ G+ SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D KK LK +G Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--EERKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKVMMQ-----VHGSKSMNIFGG----FRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEGQKIGTFERFISG----SMAGATAQTFIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKYEG 337
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 51/174 (29.31%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 258 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFG---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770 EK + + GG++ AVS+T AP++R+K+++Q H KG S+ + VK+ GI SLWRGN NVI+ P A+ F + +K+LF + + G + F +Y ++ +TRLA G Q++G+ D KK ++ +GI Sbjct: 188 EKKTGQWWKQLMAGGMAGAVSRTGTAPLDRLKVMMQ-----------VHGSKGNSNIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFVAGSLAGATAQTS----IYPMEVLKTRLA-------VGRTGQYSGMFDCAKKIMQKEGI 339
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12 Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = 3 Query: 258 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFG---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF-AGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770 EK + L GG++ AVS+T AP++R+K+++Q H KG S+ + VK+ G+ SLWRGN NVI+ P A+ F + +K+LF + + G + F AG+ +Y ++ +TRLA G Q++G+ D KK ++ +GI Sbjct: 188 EKKTGQWWKHLLAGGMAGAVSRTGTAPLDRLKVMMQ-----------VHGTKGNSNIITGLKQMVKEGGVRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFIAGSLAGATAQTS-----IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQKEGI 339
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12 Identity = 60/201 (29.85%), Postives = 88/201 (43.78%), Query Frame = 3 Query: 189 AASQGTGLALVSPVSPIFVQA-----PSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDG 767 AA+ LA P P QA P+ + +L FL GG++ +KT AP++RVK+L+Q + H YK G+ + EG L L++GN A +IR FP A+ F +++K L K G+ + AG+ Y LD R RLA K GE + G+I +K +G Sbjct: 3 AATAAAALAAADP-PPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHN---------HHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHSYTGIIHAFKTIYAKEG 183
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 44/137 (32.12%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 270 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLA 680 +S +V L GGVS ++K+ AP+ERVK+L Q + +M + + + +K+EG+ LW+GNTA ++R FP A+ + DY K NF D+ + F Y LD R RLA Sbjct: 9 TSPMVTLLAGGVSGVIAKSTIAPLERVKILYQVKSKM-------YSFNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDKKSSVQIFIAG----SLGFSCAILLTYPLDVIRARLA 132
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 3 Query: 258 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFG---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF-AGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770 EK + L GG++ AVS+T AP++R+K+++Q H KG ++ + VK+ GI SLWRGN NVI+ P A+ F + +K+LF + + G + F AG+ +Y ++ +TRLA G Q++G+ D KK ++ +G+ Sbjct: 188 EKKTGQWWKQLLAGGMAGAVSRTGTAPLDRLKVMMQ-----------VHGSKGNANIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFIAGSLAGATAQTS-----IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQREGV 339
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12 Identity = 50/172 (29.07%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 258 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNF-AFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770 EK+ + GGV+ AVS+T AP++R+K+ +Q K+ ++S + + F + +K+ G+ SLWRGN NVI+ P A+ F A++ Y K L + ++ AG+ +Y ++ +TRL +K G Q++G+ D KK L+ +G+ Sbjct: 189 EKTTGMWWKQLAAGGVAGAVSRTGTAPLDRMKVFMQVHSS--KTNKIS-----LVNGFKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQYKKLLSKDGGKVQSHERFMAGSLAGATAQTA-----IYPMEVMKTRL-----TLRKTG--QYSGMFDCAKKILRKEGV 341 The following BLAST results are available for this feature:
BLAST of CB293397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293397 ID=CB293397; Name=CB293397; organism=Citrus sinensis; type=EST; length=772bpback to top |