CB293397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11 Identity = 59/200 (29.50%), Postives = 87/200 (43.50%), Query Frame = 3 Query: 192 ASQGTGLALVSPVSPIFVQA-----PSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDG 767 A+ LA P P QA P+ + +L FL GG++ +KT AP++RVK+L+Q + H Y+ G+ K EG L L++GN A +IR FP A+ F +++K L K G+ + AG+ Y LD R RLA K GE + G+I +K +G Sbjct: 2 AAAAAALAATEP-PPAMPQAAGAGGPAARRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHN---------HHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHTYTGIIHAFKTIYAKEG 181
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11 Identity = 53/190 (27.89%), Postives = 81/190 (42.63%), Query Frame = 3 Query: 201 GTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGI 770 GT L SPV + K+ S L + G ++ AV+KTA AP++R K++ Q + S R S K RT +EG LSLWRGN+A ++R P A+ F + +K+L G Y LD R R+A K ++ +I V+ + + +G+ Sbjct: 16 GTHAILPSPVV-----SEGHKNHKSILNSLMSGALAGAVAKTAVAPLDRTKIIFQ-----VSSNRFSA--KEAYRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATIITYPLDLVRARMAVTPK-------EMYSNIIHVFMRMSREEGL 186
BLAST of CB293397 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11 Identity = 49/173 (28.32%), Postives = 78/173 (45.09%), Query Frame = 3 Query: 252 PSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDG 767 P+ + +L FL GG++ +KT AP++RVK+L+Q + K + G+ + EG L L++GN A +IR FP A+ F +++K K G+ + AG+ Y LD R RLA K GE ++G+I +K +G Sbjct: 28 PTSRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNRHYK-------HLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEG 183 The following BLAST results are available for this feature:
BLAST of CB293397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293397 ID=CB293397; Name=CB293397; organism=Citrus sinensis; type=EST; length=772bpback to top |