CB293409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 6.167e-40 Identity = 91/170 (53.53%), Postives = 112/170 (65.88%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT-PXXXXXXXXXNQWAFE 541 MSS K IVL S DGESF+VEE VA + +KH++EDDC N IPL NVTG IL+ V+EYCKKHV+ D +++L +WD +F+K +D T+F LILAANYLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDFT N WAFE Sbjct: 1 MSSNK-IVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEA--KQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.374e-39 Identity = 89/169 (52.66%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 MSS K IVL S D ESFEVEEAVA + I HMI+DDCAD IPL NVTG ILA V+EYCKKHV + D + +L++WD +F+K D T+ LILA NYLN++ LL LTCQTVAD +K +PEE+R+ FNI+ND+TP N WAFE Sbjct: 1 MSSNK-IVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHV-LDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.221e-39 Identity = 89/189 (47.09%), Postives = 107/189 (56.61%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVE----------------------VPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 S K IVL S DGESF+VEE VA + + H+IEDDCA N IP+PNVTG+ILAKV+EYCKKHVE D +E L WD F+K D T+FD+ILAANYLN++GL DL +T+AD IK TPEE+R+ FNI+NDFTP N W FE Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 4.420e-38 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 4.420e-38 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.420e-38 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 4.420e-38 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.420e-38 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 4.420e-38 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB293409 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.420e-38 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 541 I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162 The following BLAST results are available for this feature:
BLAST of CB293409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293409 ID=CB293409; Name=CB293409; organism=Citrus sinensis; type=EST; length=789bpback to top |