CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICB8 (ATP synthase subunit beta OS=Rickettsia bellii (strain OSU 85-389) GN=atpD PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.217e-52 Identity = 106/167 (63.47%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K IG++ Q+I AVVDV+F LP IL ALE + R+VLE+AQH+G+ VR IAM+ TEGLVRG V++TGSPI++PVG TLGRIMNV+GEPID KG +K I++ AP+F +Q+T++ ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 2 KKNIGKITQIISAVVDVKFTNKGKLPQILNALECYNDKQRIVLEIAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKIKGSSISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_FUSNN (ATP synthase subunit beta OS=Fusobacterium nucleatum subsp. nucleatum GN=atpD PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.217e-52 Identity = 101/161 (62.73%), Postives = 122/161 (75.78%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G + Q+I AVVD+ F + LP I AL+V LVLEV QH+G VVRT+AMD T+GL RG V++TG PIT+PVG+ LGRI+NV+GEP+D +G L E +LPIHREAP F + TE +I TGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 4 GTITQIISAVVDIAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLKRGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLNAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELIN 164
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_MARMM (ATP synthase subunit beta OS=Maricaulis maris (strain MCS10) GN=atpD PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.202e-52 Identity = 107/161 (66.46%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+ GAVVDV FD LP IL ALE + L LEVAQH+GE VRTIAMD TEGL RG V +TG PI VPVG TLGRIM+V G+PIDE GD+ PIHR AP+F EQATE ++L TGIKVVDLL PY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 6 GRIVQITGAVVDVEFDGTLPDILNALETTNDDKTLTLEVAQHLGENTVRTIAMDATEGLQRGTVVTDTGGPIMVPVGPGTLGRIMSVTGQPIDEAGDVPHTMKAPIHRPAPSFDEQATEAEVLPTGIKVVDLLCPYAKGGKIGLFGGAGVGKTVLIQELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_GEOLS (ATP synthase subunit beta OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=atpD PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.202e-52 Identity = 110/168 (65.48%), Postives = 127/168 (75.60%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVIGAV+DV F+ G LP I AL V + ++ LVLEVAQH+GE VRTIAMD T+GL RGQ V++TG I PVGR TLGRIMNVIGEP+DE G + E IHREAPAF +Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKISQVIGAVIDVEFEPGKLPEIYHALRVTNPAIDDRENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVIDTGKQICAPVGRKTLGRIMNVIGEPVDEMGPIGNEKEYGIHREAPAFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 172
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ACICJ (ATP synthase subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.202e-52 Identity = 108/165 (65.45%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K G++ Q++G VVDV+F+ LP IL ALE RLVLEVAQ +GE VR IAMD T+GL RG V +TG I VPVG TLGRI+NVIGEPIDE+G + T PIHR+AP+F EQAT +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 3 KNVTGRITQIMGPVVDVQFEGELPYILNALETRVGDRRLVLEVAQEIGERTVRCIAMDSTDGLARGDEVRDTGEAIAVPVGPETLGRILNVIGEPIDERGPIPTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICCK (ATP synthase subunit beta OS=Rickettsia canadensis (strain McKiel) GN=atpD PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.487e-52 Identity = 105/164 (64.02%), Postives = 128/164 (78.05%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ Q+I AVVDV+F LP IL ALE + R+VLEV QH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GE ID KG++K+ + I++ AP+F Q++E+ ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKITQIISAVVDVKFTNNSKLPAILNALECYSDNQRIVLEVVQHIGDDTVRCIAMDSTEGLVRGLEVVDTGSPICIPVGTATLGRIMNVVGESIDGKGEIKSSNVSSIYKPAPSFTNQSSERTILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICTY (ATP synthase subunit beta OS=Rickettsia typhi GN=atpD PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.360e-52 Identity = 105/164 (64.02%), Postives = 128/164 (78.05%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVI AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR I+M TEGL+RG V++TG+PI +PVG TLGRIMNV+GEPID KG++K+ I++ AP F+ Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKITQVISAVVDVKFTNNSKLPEILNALECYNAKQRIVLEVAQHIGDDTVRCISMGSTEGLIRGLEVIDTGNPIHIPVGIATLGRIMNVVGEPIDGKGEIKSSTISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_PROMO (ATP synthase subunit beta, sodium ion specific OS=Propionigenium modestum GN=atpD PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 9.360e-52 Identity = 102/162 (62.96%), Postives = 124/162 (76.54%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G + Q+IG VVDV F+ LP I AL++ + LV EV QH+G VVR +AMD T+GL RG V++TG ITVPVG+ LGRI+NV+GEP+DE G++K E Y PIHREAPAF +Q TE+++ TGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 GVITQIIGPVVDVTFENELPRIYNALKIDRGNGEYLVAEVQQHLGNSVVRAVAMDATDGLQRGMEVVDTGPAITVPVGKAVLGRILNVLGEPVDEAGEVKAEEYAPIHREAPAFEDQGTEKEVFETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CAUSK (ATP synthase subunit beta OS=Caulobacter sp. (strain K31) GN=atpD PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.222e-51 Identity = 106/169 (62.72%), Postives = 126/169 (74.56%), Query Frame = 3 Query: 297 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 T + G++ QVIGAVVDV F LP IL ALE V+ + RLV EVAQH+G+ VR IAMD TEGLVRGQ V +TG I VPVG TLGRIMNVIGEPIDE+G +K++ + IHR+AP F EQ ++LVTGIKV+DL+ PY +GGKIGLFGGAGV KTV + ELIN Sbjct: 63 TIRAGTGKLVQVIGAVVDVEFTGELPAILNALETVNIATGQRLVFEVAQHLGQNTVRAIAMDATEGLVRGQEVRDTGQSIRVPVGPGTLGRIMNVIGEPIDEQGPIKSDIFRTIHRDAPTFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELIN 231
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DESDA (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=atpD PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.597e-51 Identity = 102/167 (61.08%), Postives = 129/167 (77.25%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVIGAVVDV F +G LP I TALE+ + + L+ EVAQH+G+ VVRTIAMD TEGLVRG ++TG PI VPVG+ ++GRI+NVIG P+DE G + E Y PIHR APAF +Q T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGV KTV++ME+IN Sbjct: 5 IGKIVQVIGAVVDVEFSDGNLPNIFTALEIKNPNNTDAPELICEVAQHLGDNVVRTIAMDATEGLVRGMDAVDTGQPIMVPVGKPSVGRILNVIGRPVDEMGPINAEKYYPIHRPAPAFTDQNTKVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMIN 171 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |