CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_LAWIP (ATP synthase subunit beta OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=atpD PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.645e-51 Identity = 102/167 (61.08%), Postives = 131/167 (78.44%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVIGAVVDV F G LPPILTALE+ + + +L+ EVAQH+G+ +VRTIAMD TEGL RG VL+TG PI PVG+ +LGRIMNV+G+PID G + T+ YLPIHR+ P+F++Q T + L TGIKV+DLL P+ +GGK+GLFGGAGV KTV++ME+IN Sbjct: 5 IGKIVQVIGAVVDVSFPNGKLPPILTALEIHNPNSIDAPKLICEVAQHLGDDIVRTIAMDATEGLKRGMDVLDTGHPIMAPVGKASLGRIMNVVGQPIDGLGVIDTKTYLPIHRKPPSFLDQNTSVEPLETGIKVIDLLVPFPKGGKMGLFGGAGVGKTVILMEMIN 171
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CARHZ (ATP synthase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpD PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.645e-51 Identity = 100/171 (58.48%), Postives = 129/171 (75.44%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEV--------VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G+V QVIG VVDV F+ G +PPI AL++ + + L LEVAQH+G VR +AM T+GLVRG +V++TG+PITVPVGR LGR++NV+GEPID KG ++++HY PIHR AP EQ+T +IL TGIKV+DLL P+ +GGKIGLFGGAGV KTV++MELIN Sbjct: 3 VGRVVQVIGVVVDVEFEPGKVPPIYNALKIRSEDQDTPTEVPINLTLEVAQHLGNNRVRAVAMSSTDGLVRGMKVVDTGAPITVPVGRPVLGRLLNVLGEPIDGKGPVESDHYYPIHRPAPPLEEQSTRAEILETGIKVIDLLVPFLKGGKIGLFGGAGVGKTVIVMELIN 173
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB2_PELPD (ATP synthase subunit beta 2 OS=Pelobacter propionicus (strain DSM 2379) GN=atpD2 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.645e-51 Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR-----LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV F+ G LP I AL V + ++ LVLEVAQH+GE VRTIAMD T+GL RGQ VL+TG I PVG+ TLGRI+NVIGEP+DE G + + PIHREAP F +Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELIN Sbjct: 6 GKITQVIGAVVDVEFEPGKLPEIYHALRVTNPAINDSENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGNDKENPIHREAPPFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 172
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB1_PELPD (ATP synthase subunit beta 1 OS=Pelobacter propionicus (strain DSM 2379) GN=atpD1 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.645e-51 Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR-----LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV F+ G LP I AL V + ++ LVLEVAQH+GE VRTIAMD T+GL RGQ VL+TG I PVG+ TLGRI+NVIGEP+DE G + + PIHREAP F +Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELIN Sbjct: 6 GKITQVIGAVVDVEFEPGKLPEIYHALRVTNPAINDSENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGNDKENPIHREAPPFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 172
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_GRABC (ATP synthase subunit beta OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpD PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50 Identity = 106/162 (65.43%), Postives = 123/162 (75.93%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G+V Q++GAVVDV+FD LP I AL+ L+LEVAQ +GE VR IAMD T+GLVRG V + G PITVPVG TLGRI+NVIGEPIDE+G + + IHREAP+F EQA +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 6 VGRVTQILGAVVDVQFDGELPFIQNALQTRIGDRTLILEVAQELGERTVRAIAMDSTDGLVRGAEVEDLGRPITVPVGPGTLGRILNVIGEPIDERGPVDAKKTYSIHREAPSFEEQAASAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_GLUDA (ATP synthase subunit beta OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=atpD PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50 Identity = 105/162 (64.81%), Postives = 126/162 (77.78%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G+V QV GAVVDV+F+ LP IL AL V + +VLEVAQ +GE VR IAMD T+GL+RG V+ TG ITVPVG TLGRI+NVIGEPIDE+G +K++ PIHR+AP+F EQA +ILVTGIKVVDLL PY +GGK+GLFGGAGV KTV+I ELIN Sbjct: 23 VGRVTQVRGAVVDVQFEGTLPHILDALHVTFNGQTVVLEVAQEIGEHEVRCIAMDTTDGLMRGTEVVATGGQITVPVGPGTLGRILNVIGEPIDERGPVKSDKRYPIHRKAPSFDEQAAATEILVTGIKVVDLLCPYLKGGKVGLFGGAGVGKTVIIQELIN 184
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB3_PELCD (ATP synthase subunit beta 3 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD3 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.352e-50 Identity = 107/167 (64.07%), Postives = 128/167 (76.65%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIG V+DV F+ G LP I AL+V + S+ LV EVAQH+GE VR IAMD T+GLVRGQ VLNTG I+VPVGR TLGRI+NVIGEP+DE+G ++T+ IHR P FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELI+ Sbjct: 4 GKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGDEPWNLVAEVAQHLGENTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPVETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIH 170
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB1_PELCD (ATP synthase subunit beta 1 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.352e-50 Identity = 107/167 (64.07%), Postives = 128/167 (76.65%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIG V+DV F+ G LP I AL+V + S+ LV EVAQH+GE VR IAMD T+GLVRGQ VLNTG I+VPVGR TLGRI+NVIGEP+DE+G ++T+ IHR P FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELI+ Sbjct: 4 GKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGDEPWNLVAEVAQHLGENTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPVETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIH 170
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_THENN (ATP synthase subunit beta OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=atpD PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.306e-50 Identity = 101/167 (60.48%), Postives = 131/167 (78.44%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 KG+ G + V+G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL++G V++TG PIT PVG+ LGRI+NVIGEP+DE G++K++ PIHR AP +EQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGV KTVL+MELI Sbjct: 3 KGSKGYIVGVMGPVVDVKFPEEELPDIFNALEVVNPQTGQKIVLEVEQLIGDGVVRTVAMDSTDGLMKGLEVVDTGEPITAPVGKEVLGRILNVIGEPVDEAGEIKSKERWPIHRPAPELIEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SORC5 (ATP synthase subunit beta OS=Sorangium cellulosum (strain So ce56) GN=atpD PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.011e-50 Identity = 103/168 (61.31%), Postives = 127/168 (75.60%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G++ QVIG VVDV F G LP IL AL++ + S+ LVLEVAQH+GE VRTIAMD T+GLVRG V +TG PI VPVG LGRI+NV+G PIDE G + + PIHRE P F+EQ+T+ ++ TGIKV+DL+APY++GGKIGLFGGAGV KTVLI+ELIN Sbjct: 3 VGKITQVIGPVVDVDFPAGQLPKILNALKLSNPSISAEPDNLVLEVAQHLGESSVRTIAMDSTDGLVRGMEVRDTGKPIMVPVGNECLGRILNVVGVPIDEAGPVHAKKVAPIHREPPPFIEQSTKVEVFETGIKVIDLIAPYRKGGKIGLFGGAGVGKTVLILELIN 170 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |