CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CLOAB (ATP synthase subunit beta OS=Clostridium acetobutylicum GN=atpD PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.011e-50 Identity = 96/164 (58.54%), Postives = 126/164 (76.83%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFD-EGLPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G++ QVIG VVD++FD E LP I ++E+ + + +L+ EV QH+G+ +VRTIAM+GT+GL RG +NTG PI+VPVG LGR+ NV+G+ IDE GD+ + Y PIHR AP F EQ+ + ++ TGIKV+DLLAPYQ+GGKIGLFGGAGV KTVLI ELIN Sbjct: 5 VGKIVQVIGPVVDIKFDAENLPDIYNSIEIDMGDNKKLIAEVEQHVGDDIVRTIAMEGTDGLKRGMEAVNTGKPISVPVGENVLGRLFNVLGQTIDEAGDMNADKYYPIHRPAPTFEEQSVQPEMFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_THESQ (ATP synthase subunit beta OS=Thermotoga sp. (strain RQ2) GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 101/167 (60.48%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 KG+ G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGV KTVL+MELI Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_THEP1 (ATP synthase subunit beta OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 101/167 (60.48%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 KG+ G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGV KTVL+MELI Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_THEMA (ATP synthase subunit beta OS=Thermotoga maritima GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 101/167 (60.48%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 KG+ G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGV KTVL+MELI Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_STIAU (ATP synthase subunit beta OS=Stigmatella aurantiaca GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 101/167 (60.48%), Postives = 124/167 (74.25%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 +G++ QV+G V+DV F G LP + TAL+V + S+ L +EVAQH+GE +VR I+MD TEGL RGQ V NTG+PI VPVG+ TLGRI+NVIGEP+DE+G + + PIHR AP FV+Q Q TGIKV+DLL PY RGGKIGLFGGAGV KTVL+MELI Sbjct: 8 VGKITQVLGPVIDVEFPPGGLPEVYTALKVTNTSISAEADNLTIEVAQHLGENMVRCISMDSTEGLARGQAVKNTGAPIQVPVGQGTLGRILNVIGEPVDERGPITSSQTWPIHRPAPTFVDQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELI 174
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DESDG (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain G20) GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 103/167 (61.68%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVIGAVVDV F +G LP IL AL + + + L+ EVAQH+G+ VVRTIAMD TEGLVRG V +TG+PI VPVG +LGRIMNV+G P+DE GD+ LPIHR AP F EQ T ++L TGIKVVDLL P+ +GGK+GLFGGAGV KTV++ME+IN Sbjct: 4 IGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMIN 170
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CLOK5 (ATP synthase subunit beta OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 91/163 (55.83%), Postives = 129/163 (79.14%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG+V QVIG VVD++FDE LP I A+ + + +++ EVAQH+G+ +VRTI+M+ T+GL+RG L+ G+PI+VPVG+ LGR+ N++G+PIDE G+++ + Y PIHR AP+F +Q+ + ++ TGIKV+DL+APYQ+GGKIGLFGGAGV KTV+I ELIN Sbjct: 4 IGKVVQVIGPVVDIKFDEENLPDIYNAISIESGNAKIITEVAQHLGDDIVRTISMESTDGLMRGMDALDIGAPISVPVGKPVLGRLFNMLGQPIDENGEVEADEYSPIHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVIIQELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB1_GLUOX (ATP synthase subunit beta 1 OS=Gluconobacter oxydans GN=atpD1 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 105/162 (64.81%), Postives = 122/162 (75.31%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G+V QV G VVDV+F+ LP IL AL V + LVLEVAQ +GE VR IAMD T+GLVRG V +TG I VPVG TLGRI+NV+GEPIDE+G + +E PIHR AP+F EQA +ILVTGIKVVDLL PY +GGKIGLFGGAGV KTV+I ELIN Sbjct: 16 VGRVTQVRGPVVDVQFEGDLPFILNALHVQNGDHTLVLEVAQEIGERQVRCIAMDTTDGLVRGTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVIIQELIN 177
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DESVV (ATP synthase subunit beta OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=atpD PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.708e-50 Identity = 101/167 (60.48%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVIGAVVDV F G LP IL AL++ + + LV EVAQH+G+ +VRTIAMD TEGLVRG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGV KTV++ME+IN Sbjct: 5 IGKIVQVIGAVVDVEFPSGQLPNILNALDIKNPNNTDAPDLVCEVAQHLGDNIVRTIAMDATEGLVRGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMIN 171
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DESVH (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=atpD PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.708e-50 Identity = 101/167 (60.48%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVIGAVVDV F G LP IL AL++ + + LV EVAQH+G+ +VRTIAMD TEGLVRG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGV KTV++ME+IN Sbjct: 5 IGKIVQVIGAVVDVEFPSGQLPNILNALDIKNPNNTDAPDLVCEVAQHLGDNIVRTIAMDATEGLVRGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMIN 171 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |