CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_FERIS (ATP synthase subunit beta OS=Fervidobacterium islandicum GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.144e-49 Identity = 100/167 (59.88%), Postives = 127/167 (76.05%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 K ++G++ ++IG VVDV+F EG LP I AL V++ +L+LEV Q +G+ +VRT+AMD T+GLVRG V NTG PI PVGR LGR+ NVIGEPIDE+G+LK Y PIHR AP+ EQ TE +IL TG+KV+DLLAP+ +GGKIG FGGAGV KTVL+ME+I Sbjct: 3 KKSVGKIVRIIGPVVDVKFQEGDLPDIYDALVVINPQTGKKLILEVEQLIGDNIVRTVAMDSTDGLVRGLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRPAPSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMI 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_MYXXD (ATP synthase subunit beta OS=Myxococcus xanthus (strain DK 1622) GN=atpD PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.329e-49 Identity = 102/166 (61.45%), Postives = 120/166 (72.29%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 G++ QV+G VVDV F G LP + TAL+V + ++ L LEVAQH+GE VRTIAMD TEGL RG V NTG+PI VPVG+ TLGRI+NV GEP+DE G +K + Y IHR P F EQ Q+ TGIKV+DLLAPY RGGKIGLFGGAGV KTVL+ ELI Sbjct: 9 GRIIQVLGPVVDVEFPPGGLPEVYTALKVTNANLSAAADNLTLEVAQHLGENTVRTIAMDSTEGLGRGMAVTNTGAPIQVPVGKATLGRILNVTGEPVDEMGPVKAQEYWSIHRAPPPFTEQDVRVQMFETGIKVIDLLAPYTRGGKIGLFGGAGVGKTVLLQELI 174
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CLONN (ATP synthase subunit beta OS=Clostridium novyi (strain NT) GN=atpD PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.348e-49 Identity = 97/163 (59.51%), Postives = 122/163 (74.85%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G+V QVIG V+D++FD LP I A+E+ L+ EV QH+G+ VVRTIAM+ TEGL RG + +NT PI+VPVG LGR+ NV+G+ IDE+G+ K E Y PIHR AP F EQ+ E ++ TGIKV+DL+APYQ+GGKIGLFGGAGV KTVLI ELIN Sbjct: 6 VGRVVQVIGPVIDIKFDSDCLPNIYNAIEIDMGDRILITEVEQHIGDDVVRTIAMESTEGLKRGMKAVNTEKPISVPVGSEILGRLFNVLGKTIDEEGEFKAEEYYPIHRPAPTFEEQSVEPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVLIQELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DESOH (ATP synthase subunit beta OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=atpD PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.679e-49 Identity = 99/168 (58.93%), Postives = 127/168 (75.60%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG+V QV+G VVDV F+ G LP ILTAL + D + LV+EVAQH+G+ VVRTIAMD T+GLVRG V +TG+PIT+PVG +LGR++NV+G+P+D G + E +PIHR AP F EQ T +L TGIKV+DLL P+ RGGK+GLFGGAGV KTV++ME++N Sbjct: 5 IGKVVQVMGPVVDVEFEPGKLPAILTALLITNTVINDEADNLVVEVAQHLGDNVVRTIAMDVTDGLVRGMPVKDTGAPITMPVGAASLGRVLNVVGKPVDGLGPVSREKTMPIHRPAPLFTEQDTSVNVLETGIKVIDLLVPFPRGGKMGLFGGAGVGKTVIMMEMVN 172
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_FERNB (ATP synthase subunit beta OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=atpD PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.417e-49 Identity = 100/167 (59.88%), Postives = 125/167 (74.85%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 K +IG++ ++IG VVDV+F EG LP I AL V + +L+LEV Q +G+ VRT+AMD T+GL+RG V NTG PI PVGR LGR++NVIGEPIDE G+LK Y PIHR AP+ EQ TE +IL TG+KV+DLLAP+ +GGKIG FGGAGV KTVL+ME+I Sbjct: 3 KKSIGKIVRIIGPVVDVKFSEGELPDIYDALVVNNPQTGKKLILEVEQLIGDNTVRTVAMDSTDGLIRGMEVENTGEPIKAPVGRGILGRMINVIGEPIDENGELKDVEYWPIHRPAPSMAEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMI 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CLOB8 (ATP synthase subunit beta OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=atpD PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.417e-49 Identity = 96/165 (58.18%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 306 GAIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G +G+V QVIG V+D++FD + LP + A+ + LV EV QH+G+ +VRTIAM TEGL RG ++TG+PI+VPVG LGR+ NV+G+PID+ GD++ + PIHR AP+F +Q+ E ++ TGIKVVDLLAPYQRGGKIGLFGGAGV KTVLI ELIN Sbjct: 3 GKMGKVVQVIGPVIDIKFDSDSLPDLYNAIVIKAGDYELVAEVEQHVGDDIVRTIAMSATEGLKRGMDAVDTGAPISVPVGEEVLGRLFNVLGKPIDKCGDIEVKQEYPIHRPAPSFKDQSVEPEMFETGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIQELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_PHATR (ATP synthase subunit beta, chloroplastic OS=Phaeodactylum tricornutum GN=atpB PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.686e-49 Identity = 97/163 (59.51%), Postives = 125/163 (76.69%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G V Q+IG V+D++F EG LPPI +A++++ D + ++EV Q +G+ VR ++M T+GL RG ++ G+PI VPVG TLGRI NVIGEP+DE+G++K + LPIHR+APAF E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 9 GYVTQIIGPVLDIKFSEGNLPPIYSAIKIILDDNTETIVEVQQLLGDNKVRAVSMRSTDGLKRGVEAIDLGTPINVPVGTPTLGRIFNVIGEPVDEQGEVKYDETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 171
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ALKMQ (ATP synthase subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=atpD PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.686e-49 Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 3 Query: 306 GAIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G +G++ Q+IGAVVD+RF E +P +L+A+ + + +EVAQH+G+ R +AM T+GLVRG ++TG+PITVPVGR TLGRI NV+GE +DE ++ + +LPIHREAP+F EQ +I TGIKVVDL+APY RGGK+GLFGGAGV KTVLIMELIN Sbjct: 4 GNVGKLVQIIGAVVDIRFSSEEIPALLSAITIQGPDGLVTVEVAQHIGDDTARCVAMRSTDGLVRGMEAIDTGAPITVPVGRETLGRIFNVLGEVVDEGKPVEAKMHLPIHREAPSFEEQEAATEIFETGIKVVDLIAPYARGGKVGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ORITI (ATP synthase subunit beta OS=Orientia tsutsugamushi (strain Ikeda) GN=atpD PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.265e-48 Identity = 94/174 (54.02%), Postives = 132/174 (75.86%), Query Frame = 3 Query: 279 KITDEFTGKGAIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K+ ++ + +G+V QV+ AVVDV F + LP IL ALE ++ ++VLEV QH+G+ +VR +AM+ T+GL RG V++TG I VPVG+ LGRI+NV+G+PID+ G +K +++ IH++AP F+ Q+T ++IL+TGIKV+DLL PY GGKIGLFGGAGV KTVLIME+IN Sbjct: 2 KLKAKYKQQSKVGKVVQVVSAVVDVSFAGKDLPHILNALECTINNEKIVLEVVQHIGDDIVRCLAMNSTDGLFRGAEVIDTGEQIKVPVGKSILGRILNVVGQPIDDLGPIKCDNFSQIHKDAPKFINQSTSRKILITGIKVIDLLTPYISGGKIGLFGGAGVGKTVLIMEIIN 175
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SYNFM (ATP synthase subunit beta OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=atpD PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.652e-48 Identity = 98/168 (58.33%), Postives = 126/168 (75.00%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G++ QVIG VVDV F EG LPP+LTAL V D LVLEVAQH+G+ VVRTI MD T+GLVRG V +TG+PI +PVG LGR++NV+G +D G + T+ Y+PIHR APAF EQ T ++L TG+KV+DLL P+ RGGK+G+FGGAGV KTV++ME+I+ Sbjct: 3 LGKIVQVIGNVVDVEFGEGKLPPLLTALFVSNPGLNDQEDNLVLEVAQHLGDNVVRTIGMDLTDGLVRGMPVKDTGNPIMMPVGAAVLGRVINVVGRTVDGLGPVNTDTYMPIHRTAPAFTEQDTSVKVLETGVKVIDLLVPFPRGGKMGMFGGAGVGKTVVMMEMIH 170 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |