CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DROME (ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-beta PE=1 SV=3) HSP 1 Score: 235.343 bits (599), Expect = 2.903e-61 Identity = 120/163 (73.62%), Postives = 137/163 (84.05%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 A G++ VIGAVVDV+FD+ LPPIL ALEV + S RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TG PI +PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FV+ + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 36 ANGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 198
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHIL3 (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpD PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.791e-61 Identity = 121/164 (73.78%), Postives = 137/164 (83.54%), Query Frame = 3 Query: 306 GAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VVRTIAMD +EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELIN Sbjct: 10 GSVGRVTQVIGAVVDVAFEGELPKILNALETSNNGNRLVLEVAQHLGENVVRTIAMDSSEGLVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQSTESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 173
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHISN (ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 6.467e-61 Identity = 126/180 (70.00%), Postives = 142/180 (78.89%), Query Frame = 3 Query: 261 KKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 KK K T GA+G+V QVIGAVVDV F+EG LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI+VPVG+ TLGRIMNVIGEP+DE G ++T IH++APA+VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 20 KKAATAKTT-AVVATGAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNKGNRLVLEVAQHLGENAVRTIAMDSTEGLVRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPVETSSRRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 198
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_HYPNA (ATP synthase subunit beta OS=Hyphomonas neptunium (strain ATCC 15444) GN=atpD PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.103e-60 Identity = 116/161 (72.05%), Postives = 134/161 (83.23%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV FD LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V + G+PITVPVG TLGRIMNVIGEPIDE+G + + Y+PIH +APAFV+QATE ++LVTGIKV+DLL PY +GGKIGLFGGAGV KTVLIMEL+N Sbjct: 9 GRISQVIGAVVDVEFDGELPSILNALETFNNGSRLVLEVAQHLGENTVRTIAMDSTEGLVRGQPVSDIGTPITVPVGPATLGRIMNVIGEPIDERGPVNADTYMPIHAQAPAFVDQATESEVLVTGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIMELVN 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS4 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpD1 PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.103e-60 Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 7 GKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS1 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.103e-60 Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 7 GKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHIE6 (ATP synthase subunit beta OS=Rhizobium etli (strain CIAT 652) GN=atpD PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.441e-60 Identity = 120/163 (73.62%), Postives = 138/163 (84.66%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 ++G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EGLVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELIN Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 170
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHIEC (ATP synthase subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpD PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.210e-60 Identity = 119/163 (73.01%), Postives = 138/163 (84.66%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 ++G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EGLVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 170
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHORU (ATP synthase subunit beta OS=Rhodospirillum rubrum GN=atpD PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 5.475e-60 Identity = 116/165 (70.30%), Postives = 134/165 (81.21%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGV KTVLI ELIN Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHORT (ATP synthase subunit beta OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpD PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.475e-60 Identity = 116/165 (70.30%), Postives = 134/165 (81.21%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGV KTVLI ELIN Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELIN 167 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |