CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BRUA2 (ATP synthase subunit beta OS=Brucella abortus (strain 2308) GN=atpD PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.906e-59 Identity = 120/165 (72.73%), Postives = 134/165 (81.21%), Query Frame = 3 Query: 306 GAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 GAIG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 214
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_NEUCR (ATP synthase subunit beta, mitochondrial OS=Neurospora crassa GN=atp-2 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.761e-58 Identity = 114/162 (70.37%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV+FD + LPPIL ALE ++ +LVLEV+QH+GE VVR IAMDGTEGLVRG + +TG+PIT+PVG TLGRI+NV G+PIDE+G +KT+ + PIH EAP FVEQ+T +ILVTGIKVVDLLAPY RGGKIGLFGGAGV KTV I ELIN Sbjct: 49 GKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGLVRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPIKTDKFRPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 210
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_PARL1 (ATP synthase subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpD PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.004e-58 Identity = 117/163 (71.78%), Postives = 132/163 (80.98%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 A+G++ QVIGAVVDV F + LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGL RGQ V +TG+ ITVPVG TLGRI+NVIGEP+DE G +K E IH+EAP+FVEQ+TE Q+LVTGIKVVDLLAPY RGGKIGLFGGAGV KTVLI ELIN Sbjct: 4 AVGKIAQVIGAVVDVTFTDNLPAILNALETTNGGNRLVLEVAQHLGENTVRTIAMDTTEGLTRGQEVRDTGNAITVPVGEGTLGRIINVIGEPVDEAGPVKHEARREIHQEAPSFVEQSTEAQMLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_PELUB (ATP synthase subunit beta OS=Pelagibacter ubique GN=atpD PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.692e-58 Identity = 116/161 (72.05%), Postives = 132/161 (81.99%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IGAVVDV+FD LP IL+ALE + RLVLEVAQH+GE VRTIAMD TEGL RG V TG+PI VPVG TLGRI+NVIGEPIDEKG++KT+ PIHR AP F +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 4 GKITQIIGAVVDVKFDGELPEILSALECKNGDNRLVLEVAQHLGESSVRTIAMDATEGLKRGDEVTATGAPIQVPVGPETLGRIINVIGEPIDEKGEVKTKEKWPIHRAAPEFSDQSTETEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 164
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_NITWN (ATP synthase subunit beta OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=atpD PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.692e-58 Identity = 114/167 (68.26%), Postives = 134/167 (80.24%), Query Frame = 3 Query: 297 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 T +G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K + PIH EAP++ +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 3 TAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEGLVRGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ROSDO (ATP synthase subunit beta OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpD PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.741e-58 Identity = 112/163 (68.71%), Postives = 132/163 (80.98%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 A+G++ QVIGAVVDV+F + LP IL ALE ++ RLVLEVAQH+GE VR IAMD TEGLVRGQ V +T PI++PVG TLGRIMNV+GEPIDEKG + T+ IH+EAPAF EQ+T ++L TGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 4 AVGKITQVIGAVVDVQFADHLPEILNALETNNNGNRLVLEVAQHLGENTVRAIAMDATEGLVRGQTVTDTDGPISIPVGNATLGRIMNVVGEPIDEKGPVATDETRSIHQEAPAFAEQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHOS5 (ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpD PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.741e-58 Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V QVIGAVVDV+FD GLP IL ALE V++ RLVLEVAQH+GE VRTIAMD TEGLVRG V + G PI+VPVG TLGRI+NVIGEPIDEKG + + IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 7 GKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATEGLVRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPA (ATP synthase subunit beta OS=Rhodopseudomonas palustris GN=atpD PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.741e-58 Identity = 114/161 (70.81%), Postives = 134/161 (83.23%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI+VPVG TLGRIMNVIGEP+DE+G +K+E IH+EAPA+ +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGAPISVPVGAGTLGRIMNVIGEPVDEQGPIKSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BARBK (ATP synthase subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpD PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.142e-57 Identity = 112/165 (67.88%), Postives = 134/165 (81.21%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 KGA+G++ QVIGA+VDV+F+ LP IL ALE RL+LEVAQH+GE VRTIAMD T+GLVRGQ+V +TG+ I VPVG TLGRIMNVIGEP+DE G + T IH++AP ++EQ+TE +ILVTGIKVVDLLAPY +GGK+GLFGGAGV KTVLIMELIN Sbjct: 60 KGAVGEIKQVIGAIVDVQFEGALPNILNALETDRLGSRLILEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQICVPVGEATLGRIMNVIGEPVDEVGPIVTTKTRSIHQKAPEYIEQSTESEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELIN 224
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_JANSC (ATP synthase subunit beta OS=Jannaschia sp. (strain CCS1) GN=atpD PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.491e-57 Identity = 112/163 (68.71%), Postives = 133/163 (81.60%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 A+G++ QVIGAVVDV+F++ LP IL ALE + RLVLEVAQH+GEG VRTIAMD +EGLVRGQ V +T PITVPVG TLGRI+NV+GEP+DE G + E IH++AP F +Q+TE ++LVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 4 AVGKITQVIGAVVDVQFNDHLPEILNALETENDGKRLVLEVAQHLGEGTVRTIAMDSSEGLVRGQEVTDTDGPITVPVGPGTLGRILNVVGEPVDEGGPVDAEERRGIHQDAPEFADQSTEAEVLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELIN 166 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |