CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SODGM (ATP synthase subunit beta OS=Sodalis glossinidius (strain morsitans) GN=atpD PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 93/163 (57.06%), Postives = 118/163 (72.39%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 A G V QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G GVVR IAM ++GL RG +V + I VPVG+ TLGRIMNV+GEP+D KGD+ E IHR AP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGV KTV +MELI Sbjct: 2 ATGNVIQVIGAVVDVEFPQDAVPKVYNALEVENGAAKLVLEVEQQLGGGVVRCIAMGSSDGLRRGLKVTDLERAIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWSIHRPAPSYEELASSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_PHAVU (ATP synthase subunit beta, chloroplastic OS=Phaseolus vulgaris GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 95/171 (55.56%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G + Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL+RG V++TG+P++VPVG TLGRI NV+GEPID G + T PIHR AP F++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 17 KKNLGHIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ORYSJ (ATP synthase subunit beta, chloroplastic OS=Oryza sativa subsp. japonica GN=atpB PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 95/167 (56.89%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G LP I AL V + + EV Q +G VR +AM T+GL+RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ORYSI (ATP synthase subunit beta, chloroplastic OS=Oryza sativa subsp. indica GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 95/167 (56.89%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G LP I AL V + + EV Q +G VR +AM T+GL+RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ORYSA (ATP synthase subunit beta, chloroplastic OS=Oryza sativa GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 95/167 (56.89%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G LP I AL V + + EV Q +G VR +AM T+GL+RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ORYNI (ATP synthase subunit beta, chloroplastic OS=Oryza nivara GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 95/167 (56.89%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G LP I AL V + + EV Q +G VR +AM T+GL+RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_OENPA (ATP synthase subunit beta, chloroplastic OS=Oenothera parviflora GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+DE G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIAQIIGPVLDVTFPPGKMPNIYNALVVKGRDTGGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_OENGL (ATP synthase subunit beta, chloroplastic OS=Oenothera glazioviana GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+DE G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIAQIIGPVLDVTFPPGKMPNIYNALVVKGRDTGGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_OENEH (ATP synthase subunit beta, chloroplastic OS=Oenothera elata subsp. hookeri GN=atpB PE=3 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+DE G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIAQIIGPVLDVTFPPGKMPNIYNALVVKGRDTGGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_OENBI (ATP synthase subunit beta, chloroplastic OS=Oenothera biennis GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+DE G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIAQIIGPVLDVTFPPGKMPNIYNALVVKGRDTGGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |