CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_OENAR (ATP synthase subunit beta, chloroplastic OS=Oenothera argillicola GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+DE G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIAQIIGPVLDVTFPPGKMPNIYNALVVKGRDTGGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_NITOC (ATP synthase subunit beta OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=atpD PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 93/161 (57.76%), Postives = 119/161 (73.91%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 G+ Q+IGAVVDV F E +P + AL + D V L LEV Q +G+GVVRTIAM G++GL RG V NTG+PI+VPVG TLGRIM+V+GEP+DE G + E IHR+APA+ E + ++L TGIKV+DL+ P+ +GGK+GLFGGAGV KTV +MELI Sbjct: 4 GKTVQIIGAVVDVEFPRESIPKVYHALRIDD--VGLTLEVQQQLGDGVVRTIAMGGSDGLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGPVGEEERWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 162
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_COFAR (ATP synthase subunit beta, chloroplastic OS=Coffea arabica GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 95/171 (55.56%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G++ Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 17 KKNMGRIVQIIGPVLDVAFPAGKMPNIYNALVVKGRDTVGQPINVTCEVQQLLGNNRVRAVAMSSTDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGAVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CARPA (ATP synthase subunit beta, chloroplastic OS=Carica papaya GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G++ Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIH+ APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 17 KKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BEARE (ATP synthase subunit beta, chloroplastic OS=Beaucarnea recurvata GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 94/168 (55.95%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G + Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 20 LGHIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BACV8 (ATP synthase subunit beta OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=atpD PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 99/170 (58.24%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRF-------DEGLPPILTALEVVDHSVR-LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG + QVIG VVDV F D LP I AL + + R LV+EV QH+GE VRT+AMD T+GL RG V+ TG PIT+PVG GR+MNV+GE +D L E PIHRE P F E +T Q++L TGIKV+DLL PY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGHISQVIGPVVDVYFEGKGIDTDLLLPSIHDALTIKRNDGRILVVEVQQHIGEDTVRTVAMDSTDGLQRGMEVIPTGHPITMPVGNQIKGRLMNVVGEAVDGMRPLSKEGAFPIHREPPKFDELSTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELIN 174
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ATRBE (ATP synthase subunit beta, chloroplastic OS=Atropa belladonna GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 96/171 (56.14%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G+V Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL RG V++ G+PI+VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 17 KKNLGRVVQIIGPVLDVAFPPGKMPNIYNALVVQGRDSVGQPINVACEVQQLLGNNRVRAVAMSATDGLTRGMEVIDKGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SOYBN (ATP synthase subunit beta, chloroplastic OS=Glycine max GN=atpB PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.500e-44 Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTAL-----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G++ Q+IG V+DV F G +P I AL + V + + EV Q +G +R +AM TEGL+RG V++TG+ ++VPVG TLGRI NV+GEPID G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 17 KKNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGRDTVGQQINVTCEVQQLLGNNRIRAVAMSATEGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SOLTU (ATP synthase subunit beta, chloroplastic OS=Solanum tuberosum GN=atpB PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.500e-44 Identity = 96/167 (57.49%), Postives = 115/167 (68.86%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL RG V++TG+PI VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRVVQIIGPVLDVAFPPGKMPNIYNALVVQGRDSVGQPINVACEVQQLLGNNRVRAVAMSATDGLTRGMAVIDTGAPIRVPVGGATLGRIFNVLGEPVDNLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SERP5 (ATP synthase subunit beta OS=Serratia proteamaculans (strain 568) GN=atpD PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.500e-44 Identity = 93/163 (57.06%), Postives = 119/163 (73.01%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 A G++ QVIGAVVDV F + +P + ALEV + + +LVLEV Q +G GVVR IAM ++GL RG +V + PI VPVG+ TLGRIMNV+GEPID KGD+ E IHR AP++ + A Q +L TGIKV+DL+ P+ +GGK+GLFGGAGV KTV +MELI Sbjct: 2 ATGKIIQVIGAVVDVEFPQDAVPKVYNALEVENGANKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVTDLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEDLANSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |