CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_POPTM (ATP synthase subunit beta, chloroplastic OS=Populus tremuloides GN=atpB PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 95/171 (55.56%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G + Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM TEGL+RG V++TG+P++VPVG TLGRI NV+GEP+D+ + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 17 KKNLGHIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVSQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLRPVDTGTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_MESVI (ATP synthase subunit beta, chloroplastic OS=Mesostigma viride GN=atpB PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG + Q+IG V+D +F G +P I AL V + + EV Q +G+ VR +AM T+GL+RG +L+TG+P++VPVG +TLGRI NV+GEP+D GD+ + PIHR +P F+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 9 IGSITQIIGPVLDAKFPPGQMPNIYNALIVKAKNEAGEDLSVTCEVQQLLGDNQVRAVAMSATDGLMRGLEILDTGAPLSVPVGEITLGRIFNVLGEPVDGLGDVVAKTKSPIHRNSPTFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 176
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_MANSM (ATP synthase subunit beta OS=Mannheimia succiniciproducens (strain MBEL55E) GN=atpD PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 90/161 (55.90%), Postives = 118/161 (73.29%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 G++ Q+IGAV+DV F E +P + AL+V + L LEV Q +G G+VR IAM ++GL RG V NTG PI+VPVG TLGRIMNV+GEP+DE+G + E IHREAP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGV KTV +MELI Sbjct: 4 GKIVQIIGAVIDVEFPENAVPKVYDALKVAEGG--LTLEVQQQLGGGIVRCIAMGSSDGLKRGLSVSNTGKPISVPVGTKTLGRIMNVLGEPVDEQGPIGAEEEWAIHREAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 162
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_LOTJA (ATP synthase subunit beta, chloroplastic OS=Lotus japonicus GN=atpB PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTAL-----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G +P I AL + V + + EV Q +G VR +AM T+GL RG V++TG+ ++VPVG VTLGRI NV+GEPID G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIAQIIGPVLDVTFPPGKMPNIYNALIVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGVTLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_LOLPR (ATP synthase subunit beta, chloroplastic OS=Lolium perenne GN=atpB PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 89/167 (53.29%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPP------ILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ Q+IG V+DV F G P ++ +++ + + + EV Q +G VR +AM T+GL+RG V++TG+P++VPVG TLGRI NV+GEP+D G + + PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 21 GRIDQIIGPVLDVTFPPGKLPYIYNALVVQSIDTANKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ENT38 (ATP synthase subunit beta OS=Enterobacter sp. (strain 638) GN=atpD PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 92/163 (56.44%), Postives = 120/163 (73.62%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELI 794 A G++ QVIGAVVDV F + +P + ALEV + + LVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+G+PID KGD+ E IHR AP++ E ++ Q++L TGIKV+DL+ P+ +GGK+GLFGGAGV KTV +MELI Sbjct: 2 ATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLAVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEDRWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELI 164
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DAUCA (ATP synthase subunit beta, chloroplastic OS=Daucus carota GN=atpB PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 94/171 (54.97%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K +G + Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 17 KKNLGNITQIIGPVLDVAFPPGKMPNIYNALVVKGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVMDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BRASC (ATP synthase subunit beta, chloroplastic OS=Brasenia schreberi GN=atpB PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 91/172 (52.91%), Postives = 115/172 (66.86%), Query Frame = 3 Query: 300 GKGAIGQVCQVIGAVVDVRFDEGLPP------ILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 GK G++ Q+IG V+DV F G P ++ + + + EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 16 GKKIPGRIAQIIGPVLDVAFPPGKMPNIYNSLVVXGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGCTLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BARSC (ATP synthase subunit beta, chloroplastic OS=Barnardia scilloides GN=atpB PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 94/168 (55.95%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G++ Q+IG V+DV F G +P I AL V V + ++ EV Q +G VR +AM T+GL RG VL+TG+ ++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGV KTVLIMELIN Sbjct: 20 LGRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVGQQINVICEVQQLLGNNRVRAVAMSATDGLTRGMEVLDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 187
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BACFR (ATP synthase subunit beta OS=Bacteroides fragilis GN=atpD PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 95/168 (56.55%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRF-----DEGLPPILTALEVVDHS-VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG + QVIG VVDV F D LP I ALE+ H+ +L++EV QH+GE VRT+AMD T+GL RG +V TG PIT+PVG GR+MNV+G+ ID +L + IHR+ P F + T Q++L TGIKV+DLL PY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGHISQVIGPVVDVYFEGTESDLILPSIHDALEIKRHNGKKLIVEVQQHIGENTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELIN 172 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |