CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BRAJA (ATP synthase subunit beta OS=Bradyrhizobium japonicum GN=atpD PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.399e-57 Identity = 115/161 (71.43%), Postives = 131/161 (81.37%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V QVIGAVVDV+F+ LP IL +LE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRI+NVIGEPIDE G +K+E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 6 GRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIRVPVGEGTLGRIINVIGEPIDEAGPVKSEGLRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_XANP2 (ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 9.664e-57 Identity = 113/162 (69.75%), Postives = 130/162 (80.25%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VR IAMD TEGLVRG V +TG+PI VPVG TLGRIMNVIGEP+DE G ++ E IH+ AP++ EQATE +ILVTGIKVVDLLAPY +GGK+GLFGGAGV KTVLIMELIN Sbjct: 5 VGRITQVIGAVVDVQFDGHLPEILNALETTNQGNRLVLEVAQHLGESTVRCIAMDATEGLVRGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPIEAEATRGIHQPAPSYAEQATEAEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ERYLH (ATP synthase subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=atpD PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 9.664e-57 Identity = 113/161 (70.19%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G + QVIGAVVDV+F LP ILTALE + LVLEVAQH+GE VRTIAMDGT+GLVRGQ V+NTG+ I+VPVG TLGRIMNV+GEPID +G + + PIH EAPAFV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 13 GTISQVIGAVVDVQFPGELPAILTALETENGDTTLVLEVAQHLGENTVRTIAMDGTDGLVRGQEVINTGAQISVPVGPKTLGRIMNVVGEPIDMRGPVGADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 173
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.262e-56 Identity = 113/161 (70.19%), Postives = 131/161 (81.37%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.262e-56 Identity = 113/161 (70.19%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BRASO (ATP synthase subunit beta OS=Bradyrhizobium sp. (strain ORS278) GN=atpD PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.262e-56 Identity = 114/167 (68.26%), Postives = 132/167 (79.04%), Query Frame = 3 Query: 297 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 T IG+V QVIGAVVDV+F+ LP IL +LE + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PI VPVG TLGRI+NVIGEPIDE G +K ++ IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 3 TAANQIGRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRAIAMDTTEGLVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPVKADNVRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ZYMMO (ATP synthase subunit beta OS=Zymomonas mobilis GN=atpD PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.648e-56 Identity = 108/167 (64.67%), Postives = 133/167 (79.64%), Query Frame = 3 Query: 297 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 + K IG++ QVIG VVDV F+E LPP+LTALE + +VLEVAQH+GE VVRTI+MD T+GLVRGQ V++TGS I VPVG TLGRIMNV+G P+DE+G + ++ +PIH +AP F EQ+T+ IL TGIKV+DLLAPY +GGK+GLFGGAGV KTVLI ELIN Sbjct: 5 SSKKNIGRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLVRGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELIN 171
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_NITHX (ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpD PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.648e-56 Identity = 113/161 (70.19%), Postives = 131/161 (81.37%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 169
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.812e-56 Identity = 113/161 (70.19%), Postives = 129/161 (80.12%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI VPVG TLGRIMNVIGE +DE G + E IH++AP++ EQ+TE ++LVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 6 GRITQVIGAVVDVQFDSHLPEILNALETTNQGNRLVLEVAQHLGENTVRTIAMDSTEGLVRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_YEAST (ATP synthase subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP2 PE=1 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.672e-56 Identity = 112/162 (69.14%), Postives = 132/162 (81.48%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V VIGA+VDV F++ LP IL ALE+ +LVLEVAQH+GE VRTIAMDGTEGLVRG++VL+TG PI+VPVGR TLGRI+NVIGEPIDE+G +K++ PIH + P+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGV KTV I ELIN Sbjct: 44 GKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 205 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |