CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSM (ATP synthase subunit beta OS=Magnetococcus sp. (strain MC-1) GN=atpD PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.672e-56 Identity = 111/161 (68.94%), Postives = 128/161 (79.50%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V QV+G VVDVRF+ LP IL AL +V + RLVLEVA HMGEG VR IAMD T+G+VRG V +TG I VPVGR TLGRI+NV+GEP DEKG ++T LPIHR APAF +QAT +IL TGIKV+DLLAPY +GGK+GLFGGAGV KTVLIMELIN Sbjct: 7 GKVVQVVGPVVDVRFEGELPNILNALHMVRNGERLVLEVATHMGEGTVRAIAMDSTDGVVRGMEVTDTGDTIRVPVGRQTLGRILNVVGEPQDEKGPVETTETLPIHRPAPAFAQQATSAEILETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIMELIN 167
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BARHE (ATP synthase subunit beta OS=Bartonella henselae GN=atpD PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.796e-56 Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 + A+G + QVIGAVVDV+F+ LP IL ALE + RLVLEVAQH+GE VRTIAMD T+GLVRGQ+V +TG+ I+VPVG TLGRIMNVIGEP+D G + T IH+EAP +VEQ+T +ILVTGIKVVDLLAPY +GGK+GLFGGAGV KTVLIMELIN Sbjct: 54 EAAVGVIKQVIGAVVDVQFEGPLPNILNALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKTRSIHQEAPEYVEQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELIN 218
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RHILO (ATP synthase subunit beta OS=Rhizobium loti GN=atpD PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.068e-55 Identity = 112/164 (68.29%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 306 GAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G +G+V QVIGAVVDV+F + LP IL ALE + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PITVPVG LGRI+NVIGEP+DE+G + IH+ AP +VEQ+TE QIL+TGIKV+DLLAPY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 7 GVVGKVRQVIGAVVDVQFGDHLPAILNALETTNVGNRLVLEVAQHLGENTVRCIAMDSTEGLVRGQEVRDTGAPITVPVGPGMLGRIINVIGEPVDEEGPVDAIEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPYAKGGKIGLFGGAGVGKTVLIQELIN 170
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SCHPO (ATP synthase subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=atp2 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.823e-55 Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG--LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G + QVIGAVVD +F++ LP IL ALEV + + RLVLEVAQH+GE VRTIAMDGTEGLVRG V++TGSPI++PVG TLGRIMNVIGEP+DE+G +K Y PIH +AP+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGV KTV I ELIN Sbjct: 55 GSIKQVIGAVVDCQFEDADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 218
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_BARQU (ATP synthase subunit beta OS=Bartonella quintana GN=atpD PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.823e-55 Identity = 110/165 (66.67%), Postives = 131/165 (79.39%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 KGA+G++ QVIGAVVDV+F+ LP IL ALE + RLVLEVAQH+GE VRTIAMD T+GL RGQ+V +T + I VPVG TLGRIMNVIGEP+D G + T IH++AP +V+Q+T +ILVTGIKVVDLLAPY +GGK+GLFGGAGV KTVLIMELIN Sbjct: 59 KGAVGEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLTRGQKVFDTETQICVPVGEATLGRIMNVIGEPVDNVGPIATTKTRSIHQKAPEYVDQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELIN 223
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_KLULA (ATP synthase subunit beta, mitochondrial OS=Kluyveromyces lactis GN=ATP2 PE=3 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 2.380e-55 Identity = 111/162 (68.52%), Postives = 132/162 (81.48%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G+V VIGA+VDV+F++G LP IL ALE+ +LVLEVAQH+GE VRTIAMDGTEGLVRG+ V +TG+PI+VPVGR TLGRI+NVIGEPIDE+G + ++ PIH + P FVEQ+T ++L TGIKVVDLLAPY RGGKIGLFGGAGV KTV I ELIN Sbjct: 38 GKVRAVIGAIVDVQFEQGQLPAILNALEIDTPEGKLVLEVAQHLGENTVRTIAMDGTEGLVRGENVSDTGAPISVPVGRETLGRIINVIGEPIDERGPINSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 199
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_SPHAL (ATP synthase subunit beta OS=Sphingopyxis alaskensis GN=atpD PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.109e-55 Identity = 110/163 (67.48%), Postives = 131/163 (80.37%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 A G++ QVIGAVVDV+F LP IL ALE ++ RLVLEVAQH+GE VRTIAMD T+GL RGQ V +TG+ I+VPVG TLGRI+NVIGEPIDE+G + ++ PIH +AP FV+Q+TE ILVTGIKV+DL+APY +GGKIGLFGGAGV KTVLI ELIN Sbjct: 39 ATGRIAQVIGAVVDVQFTGELPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATDGLTRGQPVRDTGAQISVPVGPQTLGRILNVIGEPIDERGPVNSDMTAPIHAKAPEFVDQSTEASILVTGIKVIDLIAPYAKGGKIGLFGGAGVGKTVLIQELIN 201
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_PARDP (ATP synthase subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=atpD PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.109e-55 Identity = 111/163 (68.10%), Postives = 128/163 (78.53%), Query Frame = 3 Query: 309 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 A G++ QVIGAVVDV+FD LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PI VPVG TLGRI+NV+GEP+DE G ++ IH++AP F QAT +ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 4 ANGKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPVEATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELIN 166
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSL (ATP synthase subunit beta OS=Geobacter sulfurreducens GN=atpD PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.109e-55 Identity = 114/167 (68.26%), Postives = 129/167 (77.25%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ VL+TG I+VPVGR TLGRI+NVIGEP+DE G + E IHREAPAFV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELIN Sbjct: 6 GKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENAVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 172
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSA (ATP synthase subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpD PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.543e-54 Identity = 108/162 (66.67%), Postives = 130/162 (80.25%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G + QV+GAVVDVRFD LP IL+AL + +LVLEVAQH+GE VRTIAMD T+GL RG V++TG+ I +PVG TLGRI+NVIGEPIDE+G + + LPIH +AP FV+Q+TE +ILVTGIKV+DLLAPY +GGKIGL GGAGV KTVLIMELIN Sbjct: 6 VGTITQVLGAVVDVRFDGQLPAILSALHLEHQGKKLVLEVAQHLGESTVRTIAMDSTDGLTRGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIGNKTTLPIHADAPEFVDQSTETEILVTGIKVIDLLAPYCKGGKIGLCGGAGVGKTVLIMELIN 167 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |