CB293415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_DESVM (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=atpD PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.800e-53 Identity = 105/167 (62.87%), Postives = 132/167 (79.04%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVIGAVVDV F G LP IL+AL++ + + +LV EVAQH+G+ VVRTIAMD TEGLVRG ++TG PI VPVG+ +LGRIMNV+G P+DE G +KT+ YLPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGV KTV++ME+IN Sbjct: 5 IGKIVQVIGAVVDVEFPSGNLPNILSALDIKNPNNSDAPQLVCEVAQHLGDNVVRTIAMDATEGLVRGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPIKTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMIN 171
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICRS (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Sheila Smith) GN=atpD PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53 Identity = 107/164 (65.24%), Postives = 129/164 (78.66%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ Q+I AVVDV+F LP IL ALE + + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICRO (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Iowa) GN=atpD PE=3 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53 Identity = 107/164 (65.24%), Postives = 129/164 (78.66%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ Q+I AVVDV+F LP IL ALE + + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICPR (ATP synthase subunit beta OS=Rickettsia prowazekii GN=atpD PE=3 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53 Identity = 107/164 (65.24%), Postives = 129/164 (78.66%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ QVI AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGL+RG V++TG+PI +PVG TLGRIMNV+GEPID KG++K+ I++ AP F+ Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKITQVISAVVDVKFTNNGKLPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLIRGLEVIDTGNPIRIPVGTETLGRIMNVVGEPIDGKGEIKSATISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICAE (ATP synthase subunit beta OS=Rickettsia africae (strain ESF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53 Identity = 107/164 (65.24%), Postives = 128/164 (78.05%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKHRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_CAUCR (ATP synthase subunit beta OS=Caulobacter crescentus GN=atpD PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53 Identity = 105/167 (62.87%), Postives = 129/167 (77.25%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +GA G++ Q+IGAVVD+ FD LP IL A+E V+ + RLV EVAQH+G+ VR IAMD TEGLVRGQ V +TG PI VPVG TLGRIMNVIGEPIDE+G ++++ IHR+AP+F EQ ++LVTGIKV+DL+ PY +GGKIGLFGGAGV KTV + ELIN Sbjct: 61 EGATGRLVQIIGAVVDIEFDGALPAILNAVETVNTATGQRLVFEVAQHLGQSTVRAIAMDATEGLVRGQPVRDTGEPIRVPVGPGTLGRIMNVIGEPIDEQGPIRSDISRTIHRDAPSFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELIN 227
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_GEOBB (ATP synthase subunit beta OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpD PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.466e-53 Identity = 110/167 (65.87%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 315 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAP FV Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGV KTVLIMELIN Sbjct: 6 GKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPLFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 172
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICCN (ATP synthase subunit beta OS=Rickettsia conorii GN=atpD PE=3 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.106e-52 Identity = 107/164 (65.24%), Postives = 127/164 (77.44%), Query Frame = 3 Query: 312 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE ILVTGIKV+DLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 5 IGKITQIISAVVDVKFTNNGELPKILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTHQSTECNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_ALKOO (ATP synthase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=atpD PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.886e-52 Identity = 102/166 (61.45%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 +G +G++ Q+IG V+D+RF E LP +L A+E+ ++V+EV+QH+G+ VR +AM T+GLVRG +TG PITVPVGR TLGRI NVIGEP+DEKG + E PIHR AP+F +QAT +IL TGIKVVDL+APY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 3 EGNVGKLVQIIGPVIDIRFSRENLPNLLNAIEIEGPDGKIVVEVSQHIGDDTVRCVAMKSTDGLVRGMEAKDTGGPITVPVGRATLGRIFNVIGEPVDEKGAVAAEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAPYLKGGKIGLFGGAGVGKTVLIMELIN 168
BLAST of CB293415 vs. ExPASy Swiss-Prot
Match: ATPB_RICBR (ATP synthase subunit beta OS=Rickettsia bellii (strain RML369-C) GN=atpD PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.217e-52 Identity = 106/167 (63.47%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 303 KGAIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVXKTVLIMELIN 797 K IG++ Q+I AVVDV+F LP IL ALE + R+VLE+AQH+G+ VR IAM+ TEGLVRG V++TGSPI++PVG TLGRIMNV+GEPID KG +K I++ AP+F +Q+T++ ILVTGIKVVDLLAPY +GGKIGLFGGAGV KTVLIMELIN Sbjct: 2 KKNIGKITQIISAVVDVKFTNKGKLPQILNALECYNDKQRIVLEIAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKIKGSSISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELIN 168 The following BLAST results are available for this feature:
BLAST of CB293415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293415 ID=CB293415; Name=CB293415; organism=Citrus sinensis; type=EST; length=797bpback to top |