CB293419

Overview
NameCB293419
Unique NameCB293419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.831e-15
Identity = 59/187 (31.55%), Postives = 91/187 (48.66%), Query Frame = 2
Query:  194 EKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSG-AFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            E+Y+  +  LA  L   L+E+MGL    +     D   +  +N Y   P+   + G++ HTD G +T+L  D+ VGGL+     G  ++ V P+PG  +VNLGD      SNGR  N  H+        R+SIATF   P   A   P    + E+  +  PITF D  + +++ +L+      L +
Sbjct:  159 EEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDGGKTWITVQPVPGAFVVNLGDHG-HFLSNGRFKNADHQAVVNSECSRLSIATF-QNPSPDATVYPLAIREGENSIMEEPITFADLYRRKMAKDLEIARHKRLAK 342          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 58/197 (29.44%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  185 ETIEKYAQAIQELALDLAHKLAESMGLMDSVFQ--------DWP-CQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPA-EFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSH 745
            + +E+Y + +++LA  L      S+G+ +   +        +W     ++N Y   PE   + G+  HTDS  LTIL  + N  GL+V      +V V P PG+L+VN+GD+   + SNG   +V HR +  ++  R+S+A FL GP+     +P  + V      LY  +T+++Y + + +      +AL ++R+H
Sbjct:  165 DIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQN-NTAGLQVFRDDLGWVTVPPFPGSLVVNVGDL-FHILSNGLFKSVLHRARVNQTRARLSVA-FLWGPQSDIKISPVPKLVSPVESPLYQSVTWKEYLRTKAT---HFNKALSMIRNH 355          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = 2
Query:  194 EKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVM-DRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            E+Y++ +  LA  L   L+E+MGL    + +   D   +  +N Y   P+   + G++ HTD G +T+L  D+ VGGL+   D    ++ V P+ G  +VNLGD      SNGR  N  H+     ++ R+SIATF   P   A   P +  + E   +  PITF +  K ++  +L+     +L +
Sbjct:  157 EEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDDGNTWITVQPVEGAFVVNLGDHG-HFLSNGRFKNADHQAVVNSNSSRLSIATF-QNPAPEATVYPLKVREGEKAIMEEPITFAEMYKRKMGRDLELARLKKLAK 340          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 64/223 (28.70%), Postives = 111/223 (49.78%), Query Frame = 2
Query:  140 VADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE--------ALELVRS 742
            V++ C   D     RE +  +A+ +++LA +L   L E++GL    +  +F          +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   +V +NG+  +V HRV  +    R+S+A+F       ++ P    VE  AE    E   +Y    F+DY KL      QA E        A+E V+S
Sbjct:   97 VSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLL-KDGQWIDVPPMRLSIVVNLGD-QLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAE----ESKAIYPKFVFDDYMKLYAGLKFQAKEPRFEAMIKAMETVKS 313          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15
Identity = 62/195 (31.79%), Postives = 88/195 (45.13%), Query Frame = 2
Query:  119 DMASSQAVADFCSHLDASPHQR---ETIEKYAQAIQELALDLAHKLAESMGLMDS-------VFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITF 673
            D    + V ++      + H R   E   +Y   +  L+L+L   L ES+G++          FQ      R+N Y      + + G   H D   LTIL  D +VGGLEV    G +  + P PG L+VN+GD    + SN R  +  HR     +A R S+A FL    +  V  P E VD  HPR+Y   T+
Sbjct:  144 DEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVW-AEGRWRAIRPRPGALVVNVGDTFMAL-SNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVYPDFTW 335          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15
Identity = 61/203 (30.05%), Postives = 97/203 (47.78%), Query Frame = 2
Query:  146 DFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSG-AFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            D+    D     R   E Y+  +  LA  L   L+E+MGL    +     D   +  +N Y   P+   + G++ HTD G +T+L  D+ VGGL+     G  ++ V P+ G  +VNLGD    + SNGR  N  H+     ++ R+SIATF   P   A   P +  + E   +  PITF +  K ++S +++     +L +
Sbjct:  143 DYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYL-SNGRFKNADHQAVVNSNSSRMSIATF-QNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIEMATLKKLAK 342          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.329e-15
Identity = 57/195 (29.23%), Postives = 104/195 (53.33%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFV--DAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     R+ ++++A  ++ELA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++++NLGD   +V +NG+  +V HRV  +    R+SIA+F   P + AV +PA  +  + E   +Y    F+DY KL +    QA E
Sbjct:  105 DLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDDQWIDVPPMRHSIVINLGD-QLEVITNGKYKSVMHRVIAQTDGARMSIASF-YNPGDDAVISPASTLLKENETSEVYPKFVFDDYMKLYMGLKFQAKE 296          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.329e-15
Identity = 54/191 (28.27%), Postives = 101/191 (52.88%), Query Frame = 2
Query:  182 RETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAE----HPRLYVPITFEDYRKLRLSTNLQAGE 721
            RE +  + + +++LA +L   L E++GL  S  ++            +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   +V +NG+  +V HRV  ++   R+S+A+F     +A +      VD E    + ++Y    F+DY KL  +   QA E
Sbjct:  111 REVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGRWIDVPPMRHSIVVNLGD-QLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKE 299          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.329e-15
Identity = 61/196 (31.12%), Postives = 101/196 (51.53%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQF-----RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVE-APAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     R  ++++A  ++ LA  L   L E++GL    +   F+  P        +++ Y   P      G++ HTD+G + +L  D++VGGL+++ + G +V V P+  +++VNLGD   +V +NGR  +V HRV  +    R+SIA+F     +A +  APA   + E    Y    FEDY KL +    +A E
Sbjct:  110 DLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRG-PAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLL-KDGEWVDVPPMRHSIVVNLGD-QLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAKE 302          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15
Identity = 55/188 (29.26%), Postives = 89/188 (47.34%), Query Frame = 2
Query:  182 RETIEKYAQAIQELALDLAHKLAESMGLMDSVFQD----WPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALEL 733
            R+ IEK+    +++  +L   L E MG+    F+           IN Y   P    + G   H D   +T+L     V GLEV  + G ++ VDP P   +VN G    +V +NG L +++HR     +  R S+ATF++  +E  +    EF+  E+P  Y    F D+  +R+   ++ G +L L
Sbjct:  146 RDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGA-VNGLEVSYK-GDWIKVDPAPNAFVVNFGQ-QLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKENPPCYRTTMFRDF--MRIYNVVKLGSSLNL 328          
The following BLAST results are available for this feature:
BLAST of CB293419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
FL3H_DIACA1.831e-1531.55Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
G3OX1_ARATH2.392e-1529.44Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
FL3H_MATIN2.392e-1531.02Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCO_TOBAC2.392e-1528.701-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
GAOX1_ORYSJ3.124e-1531.79Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
FL3H_PETCR3.124e-1530.05Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
ACCO_PEA5.329e-1529.231-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO2_SOLLC5.329e-1528.271-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_ORYSI5.329e-1531.121-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
IDS3_HORVU9.090e-1529.262'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ac12_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293419 ID=CB293419; Name=CB293419; organism=Citrus sinensis; type=EST; length=793bp
GCCCCTTGAGGTGGATCTTCCTCTCGAGATCAAACGACGCAACCCCTATG
TGATCGCCGGCAGCGGCTACGTGGCTCCCACCCAGAAGAATCCTCTGTAT
GAAGCTTTGGGTCTCTACGACATGGCTTCCTCTCAAGCTGTTGCTGACTT
TTGTTCTCACCTGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAAT
ATGCTCAAGCAATACAAGAGTTGGCCTTGGATTTGGCGCATAAATTGGCC
GAGAGTATGGGGTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTT
TAGGATAAACAAGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAG
TGCAATTACACACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAA
AATGTTGGTGGCCTCGAAGTGATGGACAGATCTGGTGCATTTGTACCTGT
TGATCCCTTGCCCGGCACCCTCCTTGTCAATCTTGGAGACATTGCCACGC
AGGTATGGAGTAACGGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGC
AAGGAATCAGCAATAAGAGTATCGATTGCCACATTTCTATTGGGACCAAA
GGAGGCAGCAGTGGAAGCTCCAGCAGAGTTTGTTGATGCAGAACACCCAC
GTCTTTATGTACCAATTACTTTTGAAGACTACAGAAAGCTCCGACTGTCC
ACGAATTTGCAGGCGGGTGAAGCTCTTGAACTTGTACGTTCCCATTCCTG
AAACAATAGCCAAGAAAATTACATTGCATAGCTGACTGACATT
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