CB293419

Overview
NameCB293419
Unique NameCB293419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15
Identity = 59/198 (29.80%), Postives = 102/198 (51.52%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPA-----EFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     RE +  +A+ +++LA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   +V +NG+  +V HRV  +    R+S+A+F   P   AV  PA     +  D E  ++Y    F+DY KL      QA E
Sbjct:  105 DLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGD-QLEVITNGKYKSVLHRVIAQTDGTRMSLASF-YNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAKE 299          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15
Identity = 61/199 (30.65%), Postives = 101/199 (50.75%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAI-RVSIATFLLGPKEAAVEAPAEFV-----DAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     ++ ++++A+ ++ LA +L   L E++GL     +             +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+   ++VNLGD   +V +NGR  +V HRV  + S   R+SIA+F   P   AV  PA  +     D E   +Y    FEDY KL L    QA E
Sbjct:  105 DLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGNWIDVPPMRHAIVVNLGD-QLEVITNGRYKSVMHRVLTQTSGTGRMSIASF-YNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAKE 300          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.187e-14
Identity = 56/193 (29.02%), Postives = 100/193 (51.81%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     RE +  +A+ +++LA +L   L E++GL      ++ +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  +++VNLGD   +V +NG+  +V HRV  +    R+S+A+F   P   AV  PA  +  E  ++Y    F+DY KL      Q  E
Sbjct:  105 DLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDEQWIDVPPMRHSIVVNLGD-QLEVITNGKYKSVMHRVIAQTDGTRMSLASF-YNPGNDAVIYPAPSLIEESKQVYPKFVFDDYMKLYAGLKFQPKE 294          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.187e-14
Identity = 61/196 (31.12%), Postives = 100/196 (51.02%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQF-----RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVE-APAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     R  ++++A  ++ LA  L   L E++GL    +   F+  P        +++ Y   P      G++ HTD+G + +L  D+ VGGL+++ + G +V V P+  +++VNLGD   +V +NGR  +V HRV  +    R+SIA+F     +A +  APA   + E    Y    FEDY KL +    +A E
Sbjct:  110 DLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRG-PAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLL-KDGEWVDVPPMRHSIVVNLGD-QLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAKE 302          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.187e-14
Identity = 55/196 (28.06%), Postives = 99/196 (50.51%), Query Frame = 2
Query:  182 RETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQ---------FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            R T++++A  ++ LA  L   L E +GL     +   C           +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VN+GD   +V +NG+  +V HRV  +    R+SIA+F       ++ P  A VE  AE  + +   +Y    F+DY  L +    +A E
Sbjct:  113 RSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWIDVPPVRHSIVVNIGD-QLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRKKFEAKE 306          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.550e-14
Identity = 60/191 (31.41%), Postives = 94/191 (49.21%), Query Frame = 2
Query:  182 RETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLE-VMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            R T E Y++ +  L   L   L+E+MGL    +     D   +  IN Y   P+   + GV+ HTD G +TIL  D  VGGL+   D    ++ V P+ G  +VNLGD    + SNGR  N  H+     ++ R+SIATF   P + A+  P +  + E   L   IT+ +  K  ++ +++     +L +
Sbjct:  155 RSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQD-MVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYL-SNGRFRNADHQAVVNSTSSRLSIATF-QNPAQNAIVYPLKIREGEKAILDEAITYAEMYKKCMTKHIEVATRKKLAK 342          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.550e-14
Identity = 58/202 (28.71%), Postives = 101/202 (50.00%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQF-----RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D +   R+ ++++A+ +++LA  +   L E++GL    +   F            +++ Y   P      G++ HTD+G L +L  D+ V GL+++ + G +V V P+  ++++NLGD   +V +NG+  +V HRV  +    R+S+A+F       ++ P  A VE  AE    E   +Y    FEDY  L      QA E
Sbjct:  104 DLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLL-KDGEWVDVPPMNHSIVINLGD-QVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAE----EKKEVYPKFVFEDYMNLYAGLKFQAKE 299          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14
Identity = 60/203 (29.56%), Postives = 98/203 (48.28%), Query Frame = 2
Query:  146 DFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSG-AFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            D+    D     R   ++Y++ +  LA  L   L+E+M L    + +   D   +  +N Y   P+   + G++ HTD G +T+L  D+ VGGL+     G  ++ V P+ G  +VNLGD    + SNGR  N  H+     +  R+SIATF   P   A   P +  + E   L  PITF +  + ++S +L+     +L +
Sbjct:  143 DYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYL-SNGRFKNADHQAVVNSNHSRLSIATF-QNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLELARLKKLAK 342          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14
Identity = 54/196 (27.55%), Postives = 97/196 (49.49%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAE---HPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     R+ ++++A+ +++LA  L   L E++GL     +             +++ Y   P      G++ HTD+G + +L  D  V GL+++ + G ++ V P+  ++++N+GD   +V +NG+  +V HRV  +    R+SIA+F     +A +      VD E     ++Y    FEDY KL      QA E
Sbjct:  105 DLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLL-KDGEWIDVPPMKHSIVINIGD-QLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKLYAGLKFQAKE 298          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14
Identity = 57/200 (28.50%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     RE +  +A+ +++LA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++++NLGD   +V +NG+  +V HRV  +    R+S+A+F       ++ P  A VE  AE    E+ ++Y    F+DY KL      QA E
Sbjct:  105 DLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDDQWIDVPPMRHSIVINLGD-QLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAE----ENKQIYPKFVFDDYMKLYARLKFQAKE 298          
The following BLAST results are available for this feature:
BLAST of CB293419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ACCO3_PETHY9.090e-1529.801-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_CUCME9.090e-1530.651-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO4_SOLLC1.187e-1429.021-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_ORYSJ1.187e-1431.121-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_DORSP1.187e-1428.061-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
FNSI_PETCR1.550e-1431.41Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
ACCO_PERAE1.550e-1428.711-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
FL3H_VITVI2.025e-1429.56Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
ACCO_ACTDE2.025e-1427.551-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO4_PETHY2.025e-1428.501-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_06ac12_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293419 ID=CB293419; Name=CB293419; organism=Citrus sinensis; type=EST; length=793bp
GCCCCTTGAGGTGGATCTTCCTCTCGAGATCAAACGACGCAACCCCTATG
TGATCGCCGGCAGCGGCTACGTGGCTCCCACCCAGAAGAATCCTCTGTAT
GAAGCTTTGGGTCTCTACGACATGGCTTCCTCTCAAGCTGTTGCTGACTT
TTGTTCTCACCTGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAAT
ATGCTCAAGCAATACAAGAGTTGGCCTTGGATTTGGCGCATAAATTGGCC
GAGAGTATGGGGTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTT
TAGGATAAACAAGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAG
TGCAATTACACACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAA
AATGTTGGTGGCCTCGAAGTGATGGACAGATCTGGTGCATTTGTACCTGT
TGATCCCTTGCCCGGCACCCTCCTTGTCAATCTTGGAGACATTGCCACGC
AGGTATGGAGTAACGGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGC
AAGGAATCAGCAATAAGAGTATCGATTGCCACATTTCTATTGGGACCAAA
GGAGGCAGCAGTGGAAGCTCCAGCAGAGTTTGTTGATGCAGAACACCCAC
GTCTTTATGTACCAATTACTTTTGAAGACTACAGAAAGCTCCGACTGTCC
ACGAATTTGCAGGCGGGTGAAGCTCTTGAACTTGTACGTTCCCATTCCTG
AAACAATAGCCAAGAAAATTACATTGCATAGCTGACTGACATT
back to top