CB293419

Overview
NameCB293419
Unique NameCB293419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.645e-14
Identity = 54/198 (27.27%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  182 RETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRI----NKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPA--------EFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            R+ + KY+  ++ L L L   L+E++GL  +  ++  C   +    + Y   P+   + G   H+DSGFLTIL  D+ +GGL+++     ++ V  +PG L++N+ D+  Q+ +N +  +V+HRV   +   R+S+A    G K    E  +        E +  E+P +Y  +T +D+  +R +       +L   R
Sbjct:  205 RDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQ-IGGLQIL-LENQWIDVPFIPGALVINIADL-LQLITNDKFKSVEHRVLANKVGPRISVAV-AFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFR 398          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.645e-14
Identity = 56/195 (28.72%), Postives = 97/195 (49.74%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHP--RLYVPITFEDYRKLRLSTNLQAGE 721
            D     R+ ++++A  I+ L+  L   L E++GL  +  ++            +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G +V V P+  +++VNLGD   +V +NG+  +V HRV  +    R+SIA+F     +A +      V+ E    R Y    FEDY  L L    Q  E
Sbjct:  111 DLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGHWVDVPPMKHSIVVNLGD-QLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEKE 303          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14
Identity = 58/200 (29.00%), Postives = 100/200 (50.00%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQ------DWPC-QFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     R  ++++A  +++LA  L   L E++GL     +      + P    +++ Y   P      G++ HTD+G L +L  D+ V GL+++ + G ++ V P+  ++++NLGD   +V +NG+  +V+HRV  +    R+SIA+F       ++ P    VE  AE    E  ++Y    FEDY KL      Q  E
Sbjct:  105 DLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVINLGD-QLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAE----EKNQVYPKFVFEDYMKLYAGLKFQPKE 298          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14
Identity = 57/193 (29.53%), Postives = 98/193 (50.78%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQF---RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D S   R  ++ + + ++ LA DL   L E++GL    +  VF          +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V PL  ++++NLGD   +V +NGR  ++ HRV  ++   R+SIA+F   P   A  +PA  +  +    Y    F+DY KL      Q  E
Sbjct:  108 DMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLL-KDGDWIDVPPLNHSIVINLGD-QLEVITNGRYKSMMHRVVTQKEGNRMSIASF-YNPGSDAEISPASSLACKETE-YPSFVFDDYMKLYAGVKFQPKE 296          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14
Identity = 57/200 (28.50%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     RE +  +A+ +++LA +L   L E++GL      ++ +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  +++VNLGD   +V +NG+  +V HRV  +    R+S+A+F       ++ P +  VE  AE    E  ++Y    F+DY KL      QA E
Sbjct:  105 DLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDEQWIDVPPMRHSIVVNLGD-QLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAE----ESTQVYPKFVFDDYMKLYAGLKFQAKE 298          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.313e-13
Identity = 56/196 (28.57%), Postives = 100/196 (51.02%), Query Frame = 2
Query:  182 RETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQ---------FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            R T++++A+ +++LA  L   L E +GL     +   C           +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V PL  +++VN+GD   +V +NG+  +V HRV  +    R+SIA+F       ++ P  A VE  AE  + E   +Y    F+DY  L +    +A E
Sbjct:  113 RATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDREWIEVPPLRYSIVVNIGD-QLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAE--EEEKKEIYPKFVFQDYMNLYIRKKFEAKE 304          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.313e-13
Identity = 58/196 (29.59%), Postives = 100/196 (51.02%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFV---DAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     R+T++++A  +++LA  L   L E++GL    +  VF          +++ Y   P+     G++ H+D+G + +L  D+ V GL+++ + G +V V P+  ++++NLGD   +V +NG+  +V HRV  +    R+SIA+F   P   +  +PA  V     E    Y    F+DY KL      QA E
Sbjct:  105 DLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLL-KDGEWVDVPPMHHSIVINLGD-QIEVITNGKYKSVMHRVIAQSDGTRMSIASF-YNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAKE 297          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.714e-13
Identity = 57/178 (32.02%), Postives = 88/178 (49.44%), Query Frame = 2
Query:  191 IEKYAQAIQELALDLAHKLAESMGLMDSVFQ----DWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGA-FVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNL 709
            +E+Y++ +  L+ +L   L+E+MGL          D   +  +N Y   P+   + G++ HTD G +T+L  D  VGGL+     G  ++ V P+ G  +VNLGD      SNGR  N  H+      + R+SIATF   P   A   P    + E P L  PITF +  + ++  +L
Sbjct:  160 VERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDL-VGGLQATRDGGKNWITVQPISGAFVVNLGDHG-HFMSNGRFKNADHQAVVNGESSRLSIATF-QNPAPDARVWPLAVREGEEPILEEPITFTEMYRRKMERDL 334          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.239e-13
Identity = 55/196 (28.06%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFV---DAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     R  ++ +A+ +++LA  L   L E++GL     +             ++  Y   P++    G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++++NLGD   +V +NG+  +V HRV  +    R+SIA+F   P   AV  PA  +   + E   +Y    F+DY KL  +   QA E
Sbjct:  105 DLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDDQWIDVPPMKHSIVINLGD-QLEVITNGKYKSVLHRVVAQTDGTRMSIASF-YNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAKE 297          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.924e-13
Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 2
Query:  182 RETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPC--QFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            R+T+E Y+  +Q +A  L  K+A ++ +    ++ +F D       R+N Y   P+     G+  H+DS  LT+L    +V GL++  + G +VPV PLP   +VN+GD+  ++ +NG   +++HR        R+SIATF        V      V+ +    +  +T ++Y     S  L     L+ +R
Sbjct:  168 RDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIK-KDGKWVPVKPLPNAFIVNIGDV-LEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALR 357          
The following BLAST results are available for this feature:
BLAST of CB293419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
DV4H_CATRO2.645e-1427.27Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCO_DIACA2.645e-1428.72Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_PRUMU3.454e-1429.001-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO1_BRAJU3.454e-1429.531-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_SOLLC4.511e-1428.501-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO2_DORSP1.313e-1328.571-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO1_MALDO1.313e-1329.591-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
FL3H_HORVU1.714e-1332.02Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO_DIOKA2.239e-1328.061-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
SRG1_ARATH2.924e-1328.13Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ac12_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293419 ID=CB293419; Name=CB293419; organism=Citrus sinensis; type=EST; length=793bp
GCCCCTTGAGGTGGATCTTCCTCTCGAGATCAAACGACGCAACCCCTATG
TGATCGCCGGCAGCGGCTACGTGGCTCCCACCCAGAAGAATCCTCTGTAT
GAAGCTTTGGGTCTCTACGACATGGCTTCCTCTCAAGCTGTTGCTGACTT
TTGTTCTCACCTGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAAT
ATGCTCAAGCAATACAAGAGTTGGCCTTGGATTTGGCGCATAAATTGGCC
GAGAGTATGGGGTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTT
TAGGATAAACAAGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAG
TGCAATTACACACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAA
AATGTTGGTGGCCTCGAAGTGATGGACAGATCTGGTGCATTTGTACCTGT
TGATCCCTTGCCCGGCACCCTCCTTGTCAATCTTGGAGACATTGCCACGC
AGGTATGGAGTAACGGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGC
AAGGAATCAGCAATAAGAGTATCGATTGCCACATTTCTATTGGGACCAAA
GGAGGCAGCAGTGGAAGCTCCAGCAGAGTTTGTTGATGCAGAACACCCAC
GTCTTTATGTACCAATTACTTTTGAAGACTACAGAAAGCTCCGACTGTCC
ACGAATTTGCAGGCGGGTGAAGCTCTTGAACTTGTACGTTCCCATTCCTG
AAACAATAGCCAAGAAAATTACATTGCATAGCTGACTGACATT
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