CB293424

Overview
NameCB293424
Unique NameCB293424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.553e-24
Identity = 70/238 (29.41%), Postives = 132/238 (55.46%), Query Frame = -3
Query:  177 AKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV--TFGWVNVKDVANAHIQAFEVPSANGRYCLVERVSHYSEIVNIIRELYPAFQLPEKCADDKPHVPTYQVLKEKVKNLGIEF--IPVEVSLKETIESLKEKGFV 869
            +KDP+ E++ P V+G ++++ +C +  +++R+V TSS A  +N  + + P  V DE  ++D + C++ ++  W Y +SKTLAE AA  +A E  +DLVTI P +V+GP +  ++  S    L+LI G   + ++      +++ D+ +A I  FE P+A GRY           +  ++R+ YP + +P++    +  +   +   +K+++LG  F    +E      I + +EKG +
Sbjct:   97 SKDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSS-AGTVNLEERQRP--VYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHYSILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDDLQPVRFSSKKLQDLGFTFRYKTLEDMFDAAIRTCQEKGLI 331          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.355e-24
Identity = 67/238 (28.15%), Postives = 127/238 (53.36%), Query Frame = -3
Query:  177 DAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV--TFGWVNVKDVANAHIQAFEVPSANGRYCLVERVSHYSEIVNIIRELYPAFQLPEKCADDKPHVPTYQVLKEKVKNLGIEF-IPVEVSLKETIESLKEKGFV 872
            D++DP+ E++ P V+G L+++ +C +  ++KR+V TSS  +V    +PR      D+  +SD + C++ ++  W Y +SK LAE AA ++A E  +D ++I P +V+GP L   +  S    L+LI G + + ++      V++ D+ +A    FE P ANGRY      +    +  ++++ +P + +P+K A    ++       +K+ + G  F    E      I + ++KG +
Sbjct:   91 DSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEERPRP---AYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSKKLLDHGFSFRYTTEDMFDAAIHTCRDKGLI 325          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.081e-22
Identity = 71/239 (29.71%), Postives = 128/239 (53.56%), Query Frame = -3
Query:  171 DAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVC---KQSELWYPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNVTFG-WVNVKDVANAHIQAFEVPSANGRYCLVERVSHYSEIVNIIRELYPAFQLPEKCADDKPHVPTYQVLKEKVKNLGIEF-IPVEVSLKETIESLKEKGFVDF 872
            ++KDP+ E++ P V+G L+++ SCAK  ++KR+V TSS A  L+  + +   +  DET +SD +     K +   Y +SK LAE AA + A++ +ID ++I P +V+GP +  T   S    LSLI     Y  +  G +V++ D+  AHI  +E P A GR+      +   ++  ++R+ +P + +P +       +       +K+ ++  +F   +E   K  IE+ ++K  + F
Sbjct:  103 ESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSS-AGTLDVQEDQ--KLFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTFPPSLITALSLI--TAHYGIIKQGQYVHLDDLCEAHIFLYEHPKAEGRFICSSHHAIIYDVAKMVRQKWPEYYVPTEFKGIDKDLALVSFSSKKLMDIKFQFKHTLEDMYKGAIETCRQKQLLPF 336          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: YKJ7_SCHPO (Putative uncharacterized oxidoreductase C513.07 OS=Schizosaccharomyces pombe GN=SPAC513.07 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.023e-21
Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = -3
Query:  333 FYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTG-KPRTPDVVVDETW----FSDPEVCKQSELWYPLSKTLAEDAAWKFAKEK--SIDLVTINPAMVIGPLLQP-----TLNTSAAAVLSLIKGAQTYPNVTFGWVNVKDVANAHIQAFE-VPSANGRYCLVERVSHYSEIVNIIRELYP 881
            F  +  D + +LLDPAVKGTL +L +     SIKR+V+TSS AAV N    P    V  ++ W    + +        + Y  SK LAE+AA ++ KEK  S D+ TINP  V GP + P     +LNTS      LI G++      + +V+V+DVA AH+ A E    +NGR  + + V    +I  ++R+ +P
Sbjct:   86 FVENVTDNKSQLLDPAVKGTLGILEAAQGVKSIKRIVITSSFAAVGNFQIDPHNNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAAREYVKEKKPSYDICTINPPYVYGPPIHPMKNMDSLNTSNQIFWKLIDGSKEATPFYYYYVDVRDVAAAHVFALENAKLSNGRMLVSKGVFTTGDICKVLRKEFP 281          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.023e-21
Identity = 54/135 (40.00%), Postives = 89/135 (65.93%), Query Frame = -3
Query:  477 DAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV 872
            ++KDP+ E++ P +KG L+++ +C K  +++R++ TSS A  LN  + + P  + DE+ +SD E C++ ++  W Y +SKTLAE  AWKFAKE  +D++TI P +V+GP L PT+  S    LS I G + + ++
Sbjct:   74 ESKDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSS-AGTLNVTEDQKP--LWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIPTMPPSLITALSPITGNEAHYSI 205          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: YD541_YEAST (Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae GN=YDR541C PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.039e-17
Identity = 78/256 (30.47%), Postives = 127/256 (49.61%), Query Frame = -3
Query:  186 FYHDAKDPQVELLDPAVKGTLNVLNSCAKF--PSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDP--EVCKQSEL-WYPLSKTLAEDAAWKFAKEK----SIDLVTINPAMVIGPLL-----QPTLNTSAAAVLSLIKGA--QTYPNVTFGWVNVKDVANAHIQAFEVPSANGRYCLVERVSH-YSEIVNIIRELYPAFQLPEKCADDKPHVPTYQVLKEKV-------KNLGIEFIPVEVSLKETIESLKEK 881
            F++D  + + +LL PA++GT N+LNS  K+   +++RVV+TSS  A++   K   P VV  E  +++   E C+   +  Y  SK  AE AAW+F KE        L T+NP+++ GP L        LNTS   +  LI      + P+    +++V+DVA AH+ AF+  +  G+  +V        +I++I+ E +P  QL       KP      + +          K LG EF  +  S+ +T   + +K
Sbjct:   87 FHYDTTEYEKDLLIPALEGTKNILNSIKKYAADTVERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEFTKENEDHIKFKLTTVNPSLLFGPQLFDEDVHGHLNTSCEMINGLIHTPVNASVPDFHSIFIDVRDVALAHLYAFQKENTAGKRLVVTNGKFGNQDILDILNEDFP--QLRGLIPLGKPGTGDQVIDRGSTTDNSATRKILGFEFRSLHESVHDTAAQILKK 340          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: YGP7_YEAST (Putative uncharacterized oxidoreductase YGL157W OS=Saccharomyces cerevisiae GN=YGL157W PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.357e-17
Identity = 73/214 (34.11%), Postives = 114/214 (53.27%), Query Frame = -3
Query:  294 FYHDAKDPQVELLDPAVKGTLNVLNSCAKFPS--IKRVVLTSSMAAVLNTGKPRTPDVVV-DETWFSDP-EVCKQSELW-YPLSKTLAEDAAWKFAKEKS----IDLVTINPAMVIGPL-----LQPTLNTSAAAVLSLIK---GAQTYPNVTFGWVNVKDVANAHIQAFEVPSANG-RYCLVERVSHYSEIVNIIRELYPAFQLPEKCADDKP 881
            F+ +  + + +LL PAV GT ++L +  K+ +  +++V++TSS AA++        D+V+ +E+W  D  + C+ + +  Y  SK  AE  AW+F KE        L TINP  V GP      L+  +NTS+  V  LI    G + Y N    +++V+DV+ AH+ A E P   G R  L E +    EIV+I+ E +P  QL  K A  +P
Sbjct:   89 FHFETTNFEKDLLTPAVNGTKSILEAIKKYAADTVEKVIVTSSTAALVTPTDMNKGDLVITEESWNKDTWDSCQANAVAAYCGSKKFAEKTAWEFLKENKSSVKFTLSTINPGFVFGPQMFADSLKHGINTSSGIVSELIHSKVGGEFY-NYCGPFIDVRDVSKAHLVAIEKPECTGQRLVLSEGLFCCQEIVDILNEEFP--QLKGKIATGEP 299          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: YGD9_YEAST (Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae GN=YGL039W PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.772e-17
Identity = 81/255 (31.76%), Postives = 130/255 (50.98%), Query Frame = -3
Query:  189 YHDAKDPQVELLDPAVKGTLNVLNSCAKFPS--IKRVVLTSSMAAVLNTGKPR-TPDVVVDETWFSDP-EVCKQSELW-YPLSKTLAEDAAWKFAKEKS----IDLVTINPAMVIGPLL-----QPTLNTSAAAVLSLI--KGAQTYPNVTFGWVNVKDVANAHIQAFEVPSANG-RYCLVERVSHYSEIVNIIRELYPAFQLPEKCADDKPHVPTYQVLK-------EKVKN-LGIEFIPVEVSLKETIESLKE 878
            + +  D + +LL PAV GT ++L +   + +  +++VV+TSS+AA+ + G  + T  VV +E+W  D  E C+ + +  Y  SK  AE  AW F +E        L TINP  V GP L     +  +N+S+A + +L+  K    + N +  +++V+DV+ AH+ AFE P   G R  L E +    E ++I+ E +P  QL  K A  +P   +  + K        K KN LG +F      + +T   L E
Sbjct:   91 HFNTTDFEKDLLIPAVNGTKSILEAIKNYAADTVEKVVITSSVAALASPGDMKDTSFVVNEESWNKDTWESCQANAVSAYCGSKKFAEKTAWDFLEENQSSIKFTLSTINPGFVFGPQLFADSLRNGINSSSAIIANLVSYKLGDNFYNYSGPFIDVRDVSKAHLLAFEKPECAGQRLFLCEDMFCSQEALDILNEEFP--QLKGKIATGEPGSGSTFLTKNCCKCDNRKTKNLLGFQFNKFRDCIVDTASQLLE 343          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: GRE2_YEAST (NADPH-dependent methylglyoxal reductase GRE2 OS=Saccharomyces cerevisiae GN=GRE2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.796e-17
Identity = 81/253 (32.02%), Postives = 121/253 (47.83%), Query Frame = -3
Query:  201 FYHDAKDPQVELLDPAVKGTLNVLNSCAKFP--SIKRVVLTSSMAAVLNTGKPRTPDVVVDE------TWFSDPEVCKQSEL-WYPLSKTLAEDAAWKFAKEK----SIDLVTINPAMVIGPLL-----QPTLNTSAAAVLSL--IKGAQTYPNVTFGWVNVKDVANAHIQAFEVPSANGRYCLVERVSH-YSEIVNIIRELYPAFQ--LP-EKCADDKPHVPTYQVL--KEKVKNLGIEFIPVEVSLKETIE 881
            F  D  D + +LL PAV G   +L+S  K+   S++RVVLTSS AAV +  K     +  +E      TW    E C+   +  Y  SK  AE AAW+F +E       +L  +NP  V GP +     +  LNTS   V SL  +      P +  G+++V+DVA AH+ AF+     G+  +V        ++++I+ E +P  +  +P  K      H      L  K+  K LG +F     +LKETI+
Sbjct:   85 FCFDITDSERDLLIPAVNGVKGILHSIKKYAADSVERVVLTSSYAAVFDMAKENDKSLTFNEESWNPATW----ESCQSDPVNAYCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGPQMFDKDVKKHLNTSCELVNSLMHLSPEDKIPELFGGYIDVRDVAKAHLVAFQKRETIGQRLIVSEARFTMQDVLDILNEDFPVLKGNIPVGKPGSGATHNTLGATLDNKKSKKLLGFKF----RNLKETID 329          
BLAST of CB293424 vs. ExPASy Swiss-Prot
Match: ALD2_SPOSA (Aldehyde reductase 2 OS=Sporobolomyces salmonicolor PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 69/240 (28.75%), Postives = 108/240 (45.00%), Query Frame = -3
Query:  198 ELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDE-TWFSD--------PEVCKQSELW-YPLSKTLAEDAAWKFAKEKS--IDLVTINPAMVIGPLLQPTLNTSAAA--VLSLIKGAQTYPNVTF----GWVNVKDVANAHIQAFEVPSANGRYCL-VERVSHYSEIVNIIRELYPAFQLPEKCADDKPHVPTYQVLK--EKVKNLGIE-FIPVEVSLKETIES 851
            E++ PA+ GTLN L + A  PS+KR VLTSS  + L   KP    + +DE +W  +        PE   Q  LW Y  SKT AE AAWKF  E      L  + P   IG +  P   + + +  ++SL  G +  P +       +V+  D+   H+    +P    R          ++ ++   R+LYP+   P    D    +  +      E +K+LG   +  +E S+K+ + S
Sbjct:  103 EVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL-IPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG-EVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 340          
The following BLAST results are available for this feature:
BLAST of CB293424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
DFRA_MAIZE2.553e-2429.41Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_HORVU4.355e-2428.15Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_SOLLC9.081e-2229.71Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
YKJ7_SCHPO2.023e-2136.73Putative uncharacterized oxidoreductase C513.07 OS... [more]
DFRA_MEDSA2.023e-2140.00Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
YD541_YEAST1.039e-1730.47Putative uncharacterized oxidoreductase YDR541C OS... [more]
YGP7_YEAST1.357e-1734.11Putative uncharacterized oxidoreductase YGL157W OS... [more]
YGD9_YEAST1.772e-1731.76Putative uncharacterized oxidoreductase YGL039W OS... [more]
GRE2_YEAST8.796e-1732.02NADPH-dependent methylglyoxal reductase GRE2 OS=Sa... [more]
ALD2_SPOSA1.314e-1228.75Aldehyde reductase 2 OS=Sporobolomyces salmonicolo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ad03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ad03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293424 ID=CB293424; Name=CB293424; organism=Citrus sinensis; type=EST; length=883bp
TTTTTTTTTTTTTTTTTATATAAAATACATATGCATACAGTACTTTAATC
TGAAACAATAAAATACCAGTAGTAACAAACAGAACATTTGATCACACCAA
ACACCATGAGTCGGAGACCTTTTATTTATGTAACTTATAATAAGACTGCG
AAGGAGCTACACAGGACTCAAAAATCAACAAATCCCTTCTCCTTCAGAGA
TTCAATTGTTTCTTTGAGGCTGACCTCCACTGGGATGAACTCGATACCCA
GGTTTTTCACTTTTTCCTTCAAAACCTGATATGTCGGAACATGTGGCTTG
TCGTCCGCACACTTTTCTGGAAGCTGGAAAGCAGGGTAAAGCTCGCGTAT
AATGTTCACAATTTCTGAATAGTGTGAAACTCTTTCAACTAAACAATATC
TTCCATTGGCTGATGGAACTTCAAATGCTTGAATATGTGCATTGGCAACA
TCTTTAACGTTAACCCATCCAAAAGTTACATTTGGGTAAGTTTGTGCTCC
TTTAATTAAGCTTAGAACTGCAGCAGCACTTGTGTTAAGTGTTGGCTGTA
AGAGAGGACCAATAACCATTGCCGGGTTAATGGTAACCAAGTCAATACTC
TTCTCCTTTGCAAATTTCCAAGCTGCATCCTCAGCCAATGTCTTTGAAAG
TGGATACCAGAGCTCTGATTGCTTGCAAACCTCCGGATCCGAGAACCAAG
TCTCATCAACTACCACATCAGGGGTTCGAGGTTTTCCAGTGTTTAAAACT
GCAGCCATTGAAGATGTTAAAACCACTCGTTTGATAGAAGGGAACTTCGC
ACATGAGTTAAGAACATTAAGAGTTCCTTTCACAGCAGGATCAAGTAACT
CCACCTGCGGATCCTTGGCATCATGGTAAAAGG
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