CB293511

Overview
NameCB293511
Unique NameCB293511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293511_ssr82 microsatellite CB293511_ssr82:82..91. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11921 contig Csv1_Contig11921:283..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.529e-47
Identity = 100/188 (53.19%), Postives = 119/188 (63.30%), Query Frame = -1
Query:  261 TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYFXXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 824
            +IR  +EL    N GL+ AV   E ++ + P +SYAD YQLAGVVAVEVTGGP IPF PGR D +D   +G LPN  +G+ HLR +F  MGL D++IV LSGGHTLGR HKERS FEGPWT +PL FDNSYF             L +DKALL+DP F P V+               +H KLSELGF
Sbjct:   56 SIRFKEELNRPHNKGLEKAVAFCEEVKAKHPRVSYADLYQLAGVVAVEVTGGPAIPFTPGRKD-ADSADDGELPNPNEGASHLRTLFSRMGLLDRDIVALSGGHTLGRAHKERSDFEGPWTQDPLKFDNSYFVELLKGETPGLLQLKTDKALLDDPKFHPFVKLYAKDEDMFFKAYAISHKKLSELGF 242          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR2_YARLI (Putative cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=YALI0D04268g PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.660e-38
Identity = 87/206 (42.23%), Postives = 113/206 (54.85%), Query Frame = -1
Query:  264 TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP---PPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF----------------XXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELG 824
            T+R+  E   EANNGL+ A + LEPI+ +FP ++YAD + LAGVVA+E   GP++P+ PGR D  D    PP GRLP+  +G DHLRD+F  MG +D+EIV L G H +GRCH +RSGFEG W  NP+ F N+YF                             LP+D +L++DP F   VE                  KL ELG
Sbjct:   55 TMRYMKEAKDEANNGLENARQFLEPIKAKFPWITYADLWTLAGVVAIEEMDGPKVPWKPGRQDYVDETNVPPNGRLPDGAQGQDHLRDIFYRMGFNDQEIVALCGAHNMGRCHMDRSGFEGAWVPNPIRFANTYFKLLMNEEWKLTTLKNGVKQYFNEDEELMMLPADYSLMQDPEFHKWVEIYAADKEKFFEDFSKVFAKLIELG 260          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR_GIBZE (Cytochrome c peroxidase, mitochondrial OS=Gibberella zeae GN=CCP1 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.047e-37
Identity = 87/210 (41.43%), Postives = 115/210 (54.76%), Query Frame = -1
Query:  249 TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK--SDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF----------------XXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFADAE 824
            T+R   E  H AN GL  A   L+P++++FP ++Y+D + LAGV A++   GP IP+ PGR D+  S   P+GRLP+A+K  DHLR +FG MG +D+EIV LSG H LGRCH +RSG+ GPWT +P +  N YF                             LPSD AL+ED  F+P VEK                L+L ELG   A+
Sbjct:  134 TMRFAPESDHGANAGLAAARDFLQPVKEKFPWITYSDLWILAGVCAIQEMLGPAIPYRPGRSDRDVSGCTPDGRLPDASKRQDHLRGIFGRMGFNDQEIVALSGAHALGRCHTDRSGYSGPWTFSPTVLTNDYFRLLVEEKWQWKKWNGPAQYEDKSTKSLMMLPSDIALIEDKKFKPWVEKYAKDNDAFFKDFSNVVLRLFELGVPFAQ 343          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNE (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37
Identity = 86/210 (40.95%), Postives = 114/210 (54.29%), Query Frame = -1
Query:  249 TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF----------------XXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFADAE 824
            T+R   E  H ANNGL +A   +E I+Q+FP +SY D + L GV AV+ +GGP IP+ PGR D  ++   P+GRLP+A++  DHLR +F  MG +D+EIV LSG H +GRCH  RSGFEGPWT +P+ F N YF                             LP+D ALL+D  F+  V+               A  KL ELG  + +
Sbjct:  156 TMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAVQESGGPTIPWRPGRIDGFEAQVTPDGRLPDASQAQDHLRFIFNRMGFNDQEIVALSGAHAMGRCHTNRSGFEGPWTFSPVTFSNQYFALLRDEPWQWKKWTGPAQYEDKNTKTLMMLPTDMALLKDKSFKKYVDIYADNEEKFFSDFAKAFSKLIELGVPERQ 365          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR2_EMENI (Putative heme-binding peroxidase OS=Emericella nidulans GN=AN5440 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37
Identity = 87/212 (41.04%), Postives = 113/212 (53.30%), Query Frame = -1
Query:  264 IRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP---PPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF-----------------------XXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELG 821
            +R+  E    AN GL      LEP++++ P ++Y+D + LAGVVA+E  GGP+IP+ PGR D  D    PP GRLP+  +G+DHLR +F  MG +D+EIV L+GGH LGRCH +RSGF+GPW NNP  F N +F                                    LP+D AL +DP FRP VE+              A  KL ELG
Sbjct:   57 MRYEAEGGDPANAGLQHGRAFLEPVKEKHPWITYSDLWTLAGVVAIEEMGGPKIPWLPGRTDFVDDSKVPPRGRLPDGAQGADHLRFIFYRMGFNDQEIVALAGGHNLGRCHADRSGFQGPWVNNPTRFSNQFFKLLLNMEWKPKTLENGVSQFVYIDPEAEDHEEPLMMLPTDVALRDDPAFRPWVERYAKDKDLFFDHFSKAFAKLIELG 268          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR2_CRYNE (Putative heme-binding peroxidase OS=Cryptococcus neoformans GN=CNE03890 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.177e-36
Identity = 87/194 (44.85%), Postives = 105/194 (54.12%), Query Frame = -1
Query:  264 IRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPP--------EGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYFXXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELG 821
            +R P E    AN GL  A+  L P++     +S+AD + LAGV A+E  GGP+IP+ PGR D                RLP+   G+ H+RDVFG MG SD+EIV LSG H LGRCH +RSGF+GPW  NP  F N YF             LP+D AL+EDP FRP VEK              A  KL ELG
Sbjct:   59 MRFPPESVDPANAGLHYAISFLLPLQSANSWISHADLWTLAGVTAIEAMGGPQIPWEPGRLDYESEQAAVEHRGDVSNRLPDGALGAAHIRDVFGRMGFSDQEIVALSGAHNLGRCHADRSGFDGPWVVNPTRFSNQYF--KLLLPGTRLMMLPTDMALIEDPSFRPWVEKYAADQNLFFKDFANAFGKLIELG 250          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNV (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.008e-36
Identity = 70/134 (52.24%), Postives = 92/134 (68.66%), Query Frame = -1
Query:  429 TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF 824
            T+R   E  H ANNGL +A   +E I+Q+FP +SY D + L GV A++ +GGP IP+ PGR D   +   P+GRLP+AT+  DHLR +F  MG +D+EIV LSG H +GRCH  RSGF+GPWT +P+ F N YF
Sbjct:  156 TMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAIQESGGPTIPWRPGRIDGYAAQVTPDGRLPDATQAQDHLRFIFNRMGFNDQEIVALSGAHAMGRCHPNRSGFDGPWTFSPVTFSNQYF 289          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR2_ASPFU (Putative heme-binding peroxidase OS=Aspergillus fumigatus GN=AFUA_6G13570 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.008e-36
Identity = 88/212 (41.51%), Postives = 113/212 (53.30%), Query Frame = -1
Query:  264 IRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP---PPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF-----------------------XXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELG 821
            +R+  E    AN GL      LEP++++ P ++YAD + LAGVVA+E  GGP++ + PGR D  D    PP GRLP+AT+G++HLR VF  MG +D+EIV L+GGHTLGRCH +RSGF+GPW NNP  F N +F                                    LP+D AL  DP FR  V+K              A  KL ELG
Sbjct:   57 MRYEAEGGDPANAGLQHGRAFLEPVKEKHPWITYADLWTLAGVVAIEALGGPKVVWKPGRTDLVDDSKVPPRGRLPDATQGAEHLRAVFYRMGFNDQEIVALAGGHTLGRCHIDRSGFQGPWVNNPTRFSNQFFKLLLTLDWKPKTLPNGISQFVYVDPDAEEGDEPLMMLPTDIALKTDPAFRVWVDKYAADKDLFFDHFAKAFAKLMELG 268          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.474e-36
Identity = 93/208 (44.71%), Postives = 114/208 (54.81%), Query Frame = -1
Query:  264 TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP---PPEGRLPNA--TKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGP----------------WTNNPLIFDNSYFXXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELG 824
            ++R   EL H AN GL  A++L++PI+ ++P +SYAD +QLA   A+E  GGP+IP   GR D + P   PPEG+LP+A  +  +DHLR VF  MGL DKEIVVLSG HTLGR   ERSG+  P                WT   L FDNSYF             LP+D AL EDP F+   EK              AH KLS LG
Sbjct:  139 SLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLG 346          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR_EMENI (Cytochrome c peroxidase, mitochondrial OS=Emericella nidulans GN=ccp1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.700e-35
Identity = 82/205 (40.00%), Postives = 109/205 (53.17%), Query Frame = -1
Query:  264 TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK--SDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF----------------XXXXXXXXXXXXXLPSDKALLEDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELG 824
            T+R   E  H AN GL  A   LEPI+ +FP ++Y+D + LAG  A++  GGP+IP+ PGR DK  S   P+GRLP+ATK  DH+R +FG MG  D+E+V L G H LGR H +RSGF+GPW  +P +F N +F                              P+D AL++D  FR  VE+                +KL ELG
Sbjct:  140 TMRFAPESDHGANAGLKYARDFLEPIKAKFPWITYSDLWTLAGACAIQELGGPDIPWRPGRQDKDVSGCTPDGRLPDATKNQDHIRAIFGRMGFDDREMVALIGAHALGRAHTDRSGFDGPWNFSPTVFTNEFFRLLVEEKWQPRKWNGPKQFTDNTTKTLMMFPTDLALVQDKGFRKHVERYAKDSDAFFKEFSEVFVKLLELG 344          
The following BLAST results are available for this feature:
BLAST of CB293511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
APX5_ARATH2.529e-4753.19L-ascorbate peroxidase 5, peroxisomal OS=Arabidops... [more]
CCPR2_YARLI3.660e-3842.23Putative cytochrome c peroxidase, mitochondrial OS... [more]
CCPR_GIBZE4.047e-3741.43Cytochrome c peroxidase, mitochondrial OS=Gibberel... [more]
CCPR_CRYNE6.903e-3740.95Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
CCPR2_EMENI6.903e-3741.04Putative heme-binding peroxidase OS=Emericella nid... [more]
CCPR2_CRYNE1.177e-3644.85Putative heme-binding peroxidase OS=Cryptococcus n... [more]
CCPR_CRYNV2.008e-3652.24Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
CCPR2_ASPFU2.008e-3641.51Putative heme-binding peroxidase OS=Aspergillus fu... [more]
APX7_ORYSJ4.474e-3644.71Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
CCPR_EMENI1.700e-3540.00Cytochrome c peroxidase, mitochondrial OS=Emericel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ah07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ah07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293511 ID=CB293511; Name=CB293511; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTTTTTTTATGCTTAACATGTATCAGAAAGTTTCGCTAATTATT
TCCAGTCACAAAACTAGAACATTGTTTTTGCCACACACACAGCAACACAG
CAAACGCTCATGTGGCAGCTTTTGCTATTTTGATTACATCACATCAACCA
ATTTAAATACAAGGACATGACCAGAAATTTGAGACTTTAGAAGCCACAAT
AAAGTACATGGATAGCCGCATTCAGCTGCTTCATAATTTGATTCATTACT
CAGCATCCGCAAATCCGAGTTCTGAGAGCTTCAAATGAGCTTCAGCGTAA
TCTGCAAAGAAGGCATCCTCATCTGCAGCATATTTTTCAACAAGAGGACG
AAACACTGGGTCCTCGAGAAGAGCCTTGTCTGATGGCAGCTGAAGTAAAC
CTTCTTTCTCTCCACTCAGCAATTCCTTAAAATATGAATTGTCAAAAATA
AGTGGATTGTTAGTCCAGGGTCCTTCAAATCCAGAACGCTCCTTGTGGCA
CCTACCCAATGTATGACCGCCGGATAAAACAACGATTTCCTTATCACTCA
GACCCATGTGGCCGAAGACATCTCTCAGATGGTCAGAACCTTTGGTGGCA
TTTGGCAAGCGACCTTCTGGGGGCGGATCAGATTTGTCCGGTCTTCCAGG
GTGGAAAGGTATTTCAGGCCCTCCGGTAACTTCAACGGCAACAACTCCAG
CCAACTGATAGAAATCAGCGTAGGACAAGATAGGAAACTGCTGCTCGATG
GGCTCCAAAAGCCTGACAGCAATATCAAGACCATTGTTAGCCTCATGAGC
AAGCTCATCTGGGTGCCTGATCGT
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