CB293511

Overview
NameCB293511
Unique NameCB293511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: CCPR_CANAL (Cytochrome c peroxidase, mitochondrial OS=Candida albicans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23
Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = -1
Query:  429 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK---SDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF 812
            P+E   E N GL +    L     ++P +S  D + L GV AV+ +GGP+I + PGR D    S  PP GRLP+A+K   +++D+F  MG +++E V L G H LGRCHK  SG++GPW  +   F N ++
Sbjct:  146 PEEFDPE-NAGLQVGREFLMEFLVKYPWISRGDLWTLGGVAAVQESGGPKIEWRPGRVDDNTASKVPPNGRLPDASKDGKYVKDLFARMGFNERETVALLGAHVLGRCHKHNSGYDGPWGPSFNQFTNVFY 275          
BLAST of CB293511 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.700e-15
Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = -1
Query:  360 ELAHEANNGLDIAVRLLEPIE---QQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF------XXXXXXXXXXXXXLPSDKALLED 806
            EL    N GL  ++++L   +    +   +S+AD   +AG  AV + GGP IP   GR D + P PEG+LP  T  +  L++ F   G S +E+V LSG HT+G       GF      +P +FDN+Y+                   LPSD AL++D
Sbjct:  144 ELERPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECFKRKGFSTQELVALSGAHTIG-----SKGF-----GDPTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQD 291          
The following BLAST results are available for this feature:
BLAST of CB293511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CCPR_CANAL7.410e-2341.22Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
APX6_ARATH9.700e-1534.18Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ah07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ah07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293511 ID=CB293511; Name=CB293511; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTTTTTTTATGCTTAACATGTATCAGAAAGTTTCGCTAATTATT
TCCAGTCACAAAACTAGAACATTGTTTTTGCCACACACACAGCAACACAG
CAAACGCTCATGTGGCAGCTTTTGCTATTTTGATTACATCACATCAACCA
ATTTAAATACAAGGACATGACCAGAAATTTGAGACTTTAGAAGCCACAAT
AAAGTACATGGATAGCCGCATTCAGCTGCTTCATAATTTGATTCATTACT
CAGCATCCGCAAATCCGAGTTCTGAGAGCTTCAAATGAGCTTCAGCGTAA
TCTGCAAAGAAGGCATCCTCATCTGCAGCATATTTTTCAACAAGAGGACG
AAACACTGGGTCCTCGAGAAGAGCCTTGTCTGATGGCAGCTGAAGTAAAC
CTTCTTTCTCTCCACTCAGCAATTCCTTAAAATATGAATTGTCAAAAATA
AGTGGATTGTTAGTCCAGGGTCCTTCAAATCCAGAACGCTCCTTGTGGCA
CCTACCCAATGTATGACCGCCGGATAAAACAACGATTTCCTTATCACTCA
GACCCATGTGGCCGAAGACATCTCTCAGATGGTCAGAACCTTTGGTGGCA
TTTGGCAAGCGACCTTCTGGGGGCGGATCAGATTTGTCCGGTCTTCCAGG
GTGGAAAGGTATTTCAGGCCCTCCGGTAACTTCAACGGCAACAACTCCAG
CCAACTGATAGAAATCAGCGTAGGACAAGATAGGAAACTGCTGCTCGATG
GGCTCCAAAAGCCTGACAGCAATATCAAGACCATTGTTAGCCTCATGAGC
AAGCTCATCTGGGTGCCTGATCGT
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