CB293512

Overview
NameCB293512
Unique NameCB293512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: CCPR_CANAL (Cytochrome c peroxidase, mitochondrial OS=Candida albicans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.049e-31
Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 2
Query:  233 ILRLAWHSAGTYDVNTKTGGPFG--TIRHPDELAHEDNNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK---SDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF 697
            +LRLAWH++GTYD +  +GG +G   I  P+E   E N GL +    L     ++P +S  D + L GV AV+ +GGP+I + PGR D    S  PP GRLP+A+K   +++D+F  MG +++E V L G H LGRCHK  SG++GPW  +   F N ++
Sbjct:  117 LLRLAWHTSGTYDKSDNSGGSYGGTMIFAPEEFDPE-NAGLQVGREFLMEFLVKYPWISRGDLWTLGGVAAVQESGGPKIEWRPGRVDDNTASKVPPNGRLPDASKDGKYVKDLFARMGFNERETVALLGAHVLGRCHKHNSGYDGPWGPSFNQFTNVFY 275          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22
Identity = 66/189 (34.92%), Postives = 101/189 (53.44%), Query Frame = 2
Query:  140 YPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEDNNGLDIAVRLLEPIE---QQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF 697
            YP + +E +K V K K            A  +LRL +H AGT++++  +GG  G+I +  EL   +N GL  ++++L   +    +   +S+AD   +AG  AV + GGP IP   GR D + P PEG+LP  T  +  L++ F   G S +E+V LSG HT+G       GF      +P +FDN+Y+
Sbjct:   98 YPVMQNEIRKVVTKGK------------AAGVLRLVFHDAGTFELDDHSGGINGSIAY--ELERPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECFKRKGFSTQELVALSGAHTIG-----SKGF-----GDPTVFDNAYY 262          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_BACHD (Catalase-peroxidase OS=Bacillus halodurans GN=katG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.056e-18
Identity = 74/240 (30.83%), Postives = 100/240 (41.67%), Query Frame = 2
Query:  218 HCAPIILRLAWHSAGTYDVNT-KTGGPFGTIRHPDELAHEDNNGLDIAVRLLEPIEQQFPI-LSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------------PEGRLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH-------------------------------KER----SGFEGPWTNNPLIFDNSYF 697
            H  P  +R++WH+AGTY +   + GG  G  R     +  DN  LD A RLL PI+Q++   +S+AD   LAG VA+E  GGP I F  GR D   P                                           P+G+ P+  K +  +R+ FG MG++D+E V L +GGHT G+ H                               K R    SG EG WT NP  +DN +F
Sbjct:   88 HYGPFFIRMSWHAAGTYRIGDGRGGGGTGNQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLLVLAGNVAIEDMGGPVIGFGAGREDIWHPEEDIYWGSEKEWLTGDKRYSGDRELENPLAAVEMGLIYVNPEGPDGK-PDPIKAAHDIRETFGRMGMNDEETVALIAGGHTFGKAHGAGNPDHVGPEPEAAPIEAQGLGWQNTYGSGKGRDTITSGLEGAWTANPTQWDNGFF 326          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_ERYLH (Catalase-peroxidase OS=Erythrobacter litoralis (strain HTCC2594) GN=katG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18
Identity = 73/243 (30.04%), Postives = 94/243 (38.68%), Query Frame = 2
Query:  218 HCAPIILRLAWHSAGTYDVNTKTGGPF-GTIRHPDELAHEDNNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP---------------------PPEGRL----------------PNATKGSDH--------LRDVFGHMGLSDKEIVVL-SGGHTLGRCHKER-----------------------------------SGFEGPWTNNPLIFDNSYF 697
            H  P  +R+AWH+AGTY      GG   G  R     +  DN  LD A RLL PI+Q++   +S+AD + L G VA+E  GGP   F  GR D  +P                     P EGR                 P    G  H        +R+ F  M ++D+E V L +GGH  G+CH  +                                   SG EGPWT NP  + N YF
Sbjct:   92 HYGPFFIRMAWHAAGTYRTGDGRGGSSSGQQRFAPLNSWPDNGNLDKARRLLWPIKQKYGKHISWADLFILTGNVAIESMGGPVFGFGGGRKDVYEPEMVYWGTEEQWVDTGAETRIHPDEGRALENPLAAIQMGLIYVNPEGPGGDPHDPEGMARDMRETFARMAMNDEETVALTAGGHAFGKCHGAKPADTFGTAPEGENLHLMGMGWLTDEEEIRNGHVTTSGIEGPWTPNPTQWGNDYF 334          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_GEOKA (Catalase-peroxidase OS=Geobacillus kaustophilus GN=katG PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17
Identity = 82/271 (30.26%), Postives = 112/271 (41.33%), Query Frame = 2
Query:  152 SDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDV-NTKTGGPFGTIRHPDELAHEDNNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----------------------------------------PEGRLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH-------------------------------KER----SGFEGPWTNNPLIFDNSYF 697
            ++E+QK      K  LR L+ E          H  P+ +R+AWHSAGTY + + + GG  GT R     +  DN  LD A RLL PI++++   +S+AD   LAG VA+E  GG  I F  GR D   P                                          P+G+ P+    +  +R+ F  MG++D+E V L +GGHT G+ H                               K R    SG EG WT  P  +DNSYF
Sbjct:   58 AEEFQKLDYWALKEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGGSTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLMILAGNVAIESMGGKTIGFGGGREDVWHPEEDIYWGAEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGK-PDPVAAARDIRETFRRMGMNDEETVALIAGGHTFGKAHGAGPASHVGPEPEAAPIEAQGLGWISSYGKGKGRDTITSGIEGAWTPTPTQWDNSYF 327          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_BACST (Catalase-peroxidase OS=Bacillus stearothermophilus GN=katG PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16
Identity = 79/271 (29.15%), Postives = 108/271 (39.85%), Query Frame = 2
Query:  152 SDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGG-PFGTIRHPDELAHEDNNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----------------------------------------PEGRLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTNNPLIFDNSYF 697
            ++E+QK      K  LR L+ E          H  P+ +R+AWHSAGTY +    GG   GT R     +  DN  LD A RLL PI++++   +S+AD + LAG VA+E  GG  I F  GR D   P                                          P+G+ P+    +  +R+ F  MG++D+E V L +GGHT G+ H                                      SG EG WT  P  +D SYF
Sbjct:   58 AEEFQKLDYWALKEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDVYWGSEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGK-PDPKAAARDIRETFRRMGMNDEETVALIAGGHTFGKAHGAGPATHVGPEPEAAPIEAQGLGWISSYGKGKGSDTITSGIEGAWTPTPTQWDTSYF 327          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_GEOTN (Catalase-peroxidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=katG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 76/259 (29.34%), Postives = 102/259 (39.38%), Query Frame = 2
Query:  185 KRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGG-PFGTIRHPDELAHEDNNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----------------------------------------PEGRLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTNNPLIFDNSYF 697
            K  LR L+ E          H  P+ +R+AWHSAGTY +    GG   GT R     +  DN  LD A RLL PI++++   +S+AD + LAG VA+E  GG  I F  GR D   P                                          P+G+ P+    +  +R+ F  MG++D+E V L +GGHT G+ H                                      SG EG WT  P  +D SYF
Sbjct:   70 KEDLRKLMTESQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDIYWGAEKEWLASERHSDDGELEHPLAASVMGLIYVNPEGPDGK-PDPKAAARDIRETFRRMGMNDEETVALIAGGHTFGKAHGAGPATHVGPEPEAAPIEAQGLGWMSSYGKGKGSDTITSGIEGAWTPTPTQWDMSYF 327          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_SYMTH (Catalase-peroxidase OS=Symbiobacterium thermophilum GN=katG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 66/201 (32.84%), Postives = 89/201 (44.28%), Query Frame = 2
Query:  185 KRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGG-PFGTIRHPDELAHEDNNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPPE----------------------------------------GRLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 631
            K  LR L+ E          H  P+I+R+AWHSAGTY +    GG   G  R     +  DN  LD A RLL PI+Q++   +S+AD   LAG VA+E  G   I F  GR D  +P  +                                        GR P+  K +  +R+ F  MG++D+E V L +GGHT G+ H
Sbjct:   58 KEDLRKLMTESQDWWPADFGHYGPLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETFKRMGMNDEETVALIAGGHTFGKTH 258          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_ARCFU (Catalase-peroxidase OS=Archaeoglobus fulgidus GN=katG PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 61/180 (33.89%), Postives = 84/180 (46.67%), Query Frame = 2
Query:  218 HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEDNNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------PEGRLPNATKG---------------------------------SDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 631
            H  P+ +RLAWHSAG+Y +    GG   G+IR P  +   DN  LD A+RLL PI++++   LS+AD   LAG VA+E  G     F  GR D  +P       PE  +  A +G                                 +  +R  F  MG++D+E V L +GGH  G+CH
Sbjct:   76 HYGPLFIRLAWHSAGSYRIFDGRGGARDGSIRFPPRINWPDNINLDKAIRLLWPIKKKYGRKLSWADLIILAGTVAMEDMGVKLFGFALGREDIFEPDESPDWGPEEEMLTAKRGEKEELERPFAATEMGLIYVNPEGPGGNPDPLGSAQEIRVAFRRMGMNDEETVALIAGGHAFGKCH 255          
BLAST of CB293512 vs. ExPASy Swiss-Prot
Match: KATG_THELT (Catalase-peroxidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=katG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15
Identity = 60/181 (33.15%), Postives = 89/181 (49.17%), Query Frame = 2
Query:  218 HCAPIILRLAWHSAGTYDVNTKTGG-PFGTIRHPDELAHEDNNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPP----------------EGRL----------------------PNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 631
            H  P+ +RL+WHSAG+Y ++   GG   G+IR P  +   DN  LD A+RLL PI++++   LS+AD   LAG VA++  G   + F  GR D  ++D  P                EG L                      P+ +  +  +R  F  MG++D+E V L +GGH+ G+CH
Sbjct:   75 HYGPLFIRLSWHSAGSYRIHDGRGGAKNGSIRFPARINWPDNINLDKAIRLLWPIKKKYGKKLSWADLIILAGTVALQDMGVKILGFSLGREDVFEADESPDWGAEQEMLSGKERFKEGELEKPFAATEMGLIYVNPEGPMGNPDPSGSAKEIRLAFTRMGMNDEETVALIAGGHSFGKCH 255          
The following BLAST results are available for this feature:
BLAST of CB293512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
CCPR_CANAL8.049e-3142.50Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
APX6_ARATH5.229e-2234.92Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]
KATG_BACHD2.056e-1830.83Catalase-peroxidase OS=Bacillus halodurans GN=katG... [more]
KATG_ERYLH5.983e-1830.04Catalase-peroxidase OS=Erythrobacter litoralis (st... [more]
KATG_GEOKA1.333e-1730.26Catalase-peroxidase OS=Geobacillus kaustophilus GN... [more]
KATG_BACST1.128e-1629.15Catalase-peroxidase OS=Bacillus stearothermophilus... [more]
KATG_GEOTN3.283e-1629.34Catalase-peroxidase OS=Geobacillus thermodenitrifi... [more]
KATG_SYMTH1.629e-1532.84Catalase-peroxidase OS=Symbiobacterium thermophilu... [more]
KATG_ARCFU1.629e-1533.89Catalase-peroxidase OS=Archaeoglobus fulgidus GN=k... [more]
KATG_THELT2.128e-1533.15Catalase-peroxidase OS=Thermotoga lettingae (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ah07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ah07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293512 ID=CB293512; Name=CB293512; organism=Citrus sinensis; type=EST; length=740bp
GCACTAGGCCGGTCCAATTTCTTCCACACAACACCCGCGTCTCGGTTCTT
CAGCTCGTCACAGTTCAGTTCGGTCATCGCATTCGACAGTTCAGTTCAGC
TGAGCTTCTTCTTCTTCTTTTTTCATCAGGGGAAAGTGTTATCCAAAAGT
GAGCGATGAGTATCAGAAAGCAGTGGAGAAATGCAAGAGGAAACTCAGAG
GACTCATTGCTGAGAAACACTGTGCCCCTATCATTCTTCGCTTGGCATGG
CACTCAGCGGGGACTTATGACGTGAACACTAAGACAGGAGGGCCTTTTGG
GACGATCAGGCACCCAGATGAGCTTGCTCATGAGGATAACAATGGTCTTG
ATATTGCTGTCAGGCTTTTGGAGCCCATCGAGCAGCAGTTTCCTATCTTG
TCCTACGCTGATTTCTATCAGTTGGCTGGAGTTGTTGCCGTTGAAGTTAC
CGGAGGGCCTGAAATACCTTTCCACCCTGGAAGACCGGACAAATCTGATC
CGCCCCCAGAAGGTCGCTTGCCAAATGCCACCAAAGGTTCTGACCATCTG
AGAGATGTCTTCGGCCACATGGGTCTGAGTGATAAGGAAATCGTTGTTTT
ATCCGGCGGTCATACATTGGGTAGGTGCCACAAGGAGCGTTCTGGATTTG
AAGGACCCTGGACTAACAATCCACTTATTTTTGACAATTCATATTTTAAG
GAATTGCTGAGTGGAGAGAAAGAAGGTCTACTTCAGCTGC
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