CB293516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11 Identity = 38/121 (31.40%), Postives = 55/121 (45.45%), Query Frame = -2 Query: 503 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 862 + P + Y+GG F + P Y PP VK T+IWHPN+ G +C+S+L D G W P T+ + N P N+EAA+ ++DF+ KV +RR Sbjct: 69 VSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTG-------WAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRR 182
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11 Identity = 35/113 (30.97%), Postives = 53/113 (46.90%), Query Frame = -2 Query: 530 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFK 868 TI+GP D+ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ R ++ Sbjct: 36 TIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = -2 Query: 506 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVR 865 +I P + Y+GG F YP+ PP VK T ++HPN+ +G VC++IL E W PV T+ PN E P N EAA+ ++ R F++ V R +R Sbjct: 63 VICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 169
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = -2 Query: 506 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVR 865 +I P + Y+GG F YP+ PP VK T ++HPN+ +G VC++IL E W PV T+ PN E P N EAA+ ++ R F++ V R +R Sbjct: 63 VICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 169
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 34/113 (30.09%), Postives = 53/113 (46.90%), Query Frame = -2 Query: 530 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFK 868 TI+GP ++ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ R ++ Sbjct: 36 TIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = -2 Query: 503 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 862 + P + Y+GG F P Y PP VK T+IWHPN+ G +C+S+L D G W P T+ + N + P N+EAA+ ++DF+ KV ++R Sbjct: 69 VSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKR 182
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 36/107 (33.64%), Postives = 50/107 (46.73%), Query Frame = -2 Query: 548 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRD 868 TI G T+YE + + FPS YP + PTVKF T +HPNV G +C+ IL E+W ++ V PN +SP N AA+ W++ Sbjct: 65 TIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDIL-------------KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 33/113 (29.20%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 530 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFK 868 +I+GPPD+ Y GG F + FP++YP PP + TT+I+HPN+ +G +C+ IL ++W P T+ N + P E A ++ R ++ Sbjct: 36 SIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYE 135
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 35/109 (32.11%), Postives = 51/109 (46.79%), Query Frame = -2 Query: 542 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRR 868 TI+GP D+ + GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P TV PN + P E A ++ R Sbjct: 36 TIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDR 131
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 33/113 (29.20%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 530 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFK 868 TI+GP ++ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ ++ ++ Sbjct: 36 TIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYE 135 The following BLAST results are available for this feature:
BLAST of CB293516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293516 ID=CB293516; Name=CB293516; organism=Citrus sinensis; type=EST; length=869bpback to top |