CB293516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.372e-27 Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = -2 Query: 542 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAA---KEWRDRR 865 I GPP+T YEGG+F A + FP +YP SPP +F T++WHPN+Y G VCISILHPP DDP EL SERW P V PN SPANV+A+ ++W++ + Sbjct: 45 IFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESK 155
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.496e-24 Identity = 57/119 (47.90%), Postives = 74/119 (62.18%), Query Frame = -2 Query: 494 DTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 850 D++Y GGFF A M FP ++P SPP +FT I+HPNVY DGR+CISILH G DP E +E W PV TVE PN SPANV+AA ++R + +K++V V RS++ Sbjct: 52 DSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSG-DPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKMEVERSKQ 169
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.257e-24 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = -2 Query: 500 GPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 859 GPPDTLYEGG F A ++FP YP +PP + FT+E+WHPN+YPDG++CISILH + G W P ++ PN +SPANV+AAK +R + + + +V R V++S Sbjct: 39 GPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGM-----TWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKLMHKEDLESYPMEVKRTVKKS 158
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.257e-24 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = -2 Query: 500 GPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 859 GPPDTLYEGG F A ++FP YP +PP + FT+E+WHPN+YPDGR+CISILH + G W P ++ PN +SPANV+AAK +R + + + +V + V++S Sbjct: 39 GPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGM-----TWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKS 158
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.261e-24 Identity = 55/125 (44.00%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 500 GPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 859 GP DTLYEGG F A + FP NYP PP + FT+E+WHPN+Y DGRVCISILH + G W PV ++ PN +SPANV+AAK +R + + + +V R V++S Sbjct: 39 GPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGM-----TWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKEDLESYPMEVKRTVKKS 158
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23 Identity = 53/125 (42.40%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 500 GPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 859 GP DT YEGG F A ++FP NYP PP + FT+E+WHPN+YPDGR+CISILH + G W P +E PN +SPANV+AAK +R + + + +V + V++S Sbjct: 39 GPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGM-----TWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKS 158
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.336e-22 Identity = 51/125 (40.80%), Postives = 71/125 (56.80%), Query Frame = -2 Query: 500 GPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 859 GPPDTLYEGG F A + FP YP PP + FT+E+WHPN+Y DG++CISILH + G W P ++ PN +SPANV+AAK +R + + + +V + V++S Sbjct: 39 GPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGM-----TWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKS 158
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.085e-19 Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = -2 Query: 488 DTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISIL-HPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 850 D+LY G A+M FPS+YP PPT+KF ++++HPN+Y DG++CISIL D + + ++W PV + SPN SPANV+A+ +RD +++ K+V R R E L Sbjct: 77 DSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIAREEDEKL 198
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19 Identity = 49/124 (39.52%), Postives = 64/124 (51.61%), Query Frame = -2 Query: 494 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 865 IIGP DT YE G F ++ F YPN PP VKF +E++HPNVY +G +C+ IL RW P + V PN SPANVEAA ++D + + K+V V +S E Sbjct: 40 IIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDIL-------------QNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19 Identity = 49/124 (39.52%), Postives = 64/124 (51.61%), Query Frame = -2 Query: 494 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 865 IIGP DT +E G F +M F YPN PP VKF +E++HPNVY G +C+ IL RW P + V PN SPANVEA+ ++D R ++ K+V V +S E Sbjct: 40 IIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDIL-------------QNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRETVEKSWE 150 The following BLAST results are available for this feature:
BLAST of CB293516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293516 ID=CB293516; Name=CB293516; organism=Citrus sinensis; type=EST; length=869bpback to top |