CB293516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GP DT ++GG F + F +YPN PPTV+F + ++HPN+Y DG +C+ IL +W P++ V PN SPAN EAA+ + + + ++ ++V V +S Sbjct: 40 IFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17 Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI GP DT YEG F MSFP+NYP SPPT+ FT+ +WHPNV G +C+ IL ++W V+ V+ PN+ SP N +AA+ W ++K+ Sbjct: 64 TITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDIL-------------KDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKR 164
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.040e-17 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GP DT ++GG F + F +YPN PP V+F + ++HPN+Y DG +C+ IL +W P++ V PN +SPAN EAA+ + + + ++ +KV V +S Sbjct: 40 IFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.040e-17 Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GP +T +E G F + F YPN PPTVKF ++++HPNVY DG +C+ IL RW P + V PN SPAN AA+ +++ R +++K+V + V +S Sbjct: 40 IFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.040e-17 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GP DT ++GG F + F +YPN PPTV+F + ++HPN+Y DG +C+ IL +W P++ V PN SPAN EAA+ + + + ++ ++V V +S Sbjct: 40 IFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.583e-17 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GP D+++EG F + F YPN PTVKF ++++HPNVY DG +C+ IL +W P++ + PN SPAN E+A+ +R+ + ++ +KV V +S Sbjct: 40 IFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDIL-------------QNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GP T +E G F + F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 40 IFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GP T +E G F + F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 40 IFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.123e-16 Identity = 41/122 (33.61%), Postives = 66/122 (54.10%), Query Frame = -2 Query: 500 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 865 I GPP+T +E G F ++F YPN PPTV+F ++++HPN+Y +G +C+ IL RW P + V PN SPANV+AA+ +++ +++++V + V S Sbjct: 40 IFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDIL-------------QNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKKTVELS 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.267e-16 Identity = 43/118 (36.44%), Postives = 57/118 (48.31%), Query Frame = -2 Query: 512 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRC 865 I GP DT Y G F + FP NYP PP +KF + +WHPNV G +C+ IL E+W V+ VE PN+ SP N AA+ W ++++KKV C Sbjct: 45 ITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDIL-------------KEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLAC 149 The following BLAST results are available for this feature:
BLAST of CB293516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293516 ID=CB293516; Name=CB293516; organism=Citrus sinensis; type=EST; length=869bpback to top |