CB293516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15 Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = -2 Query: 521 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKV 865 I G P T +EGG + M+FP YP PP +FT ++HPNVYP G VC+SIL+ E W P T++ PN SPA EA ++ + +++K+V Sbjct: 45 IPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN-----------EEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRV 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15 Identity = 43/114 (37.72%), Postives = 59/114 (51.75%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI G DT+YE F + FP++YP PPTVKF T+ +HPNV +G +C+ IL ++W PV+ V PN+ESP N AA W +D++KK Sbjct: 41 TIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDIL-------------KDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLW-SNQDEYKK 140
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.058e-14 Identity = 41/114 (35.96%), Postives = 54/114 (47.37%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 T+ GP DT+YE + + FPS+YP PP VKFTT WHPNV G +C+ IL E W + V PN+ SP N +AA W + ++KK Sbjct: 65 TLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL-------------KENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKK 164
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.162e-13 Identity = 38/122 (31.15%), Postives = 59/122 (48.36%), Query Frame = -2 Query: 503 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 868 TI+GPPD+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + R+ Sbjct: 36 TIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 144
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 35/114 (30.70%), Postives = 58/114 (50.88%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GPPD+ Y+GG F + FP++YP PP + FTT+I+HPN+ +G +C+ IL +W P TV PN + P + A+ ++ ++ + + Sbjct: 36 TIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 35/114 (30.70%), Postives = 58/114 (50.88%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GPPD+ Y+GG F + FP++YP PP + FTT+I+HPN+ +G +C+ IL +W P TV PN + P + A+ ++ ++ + + Sbjct: 36 TIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 35/114 (30.70%), Postives = 58/114 (50.88%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GPPD+ Y+GG F + FP++YP PP + FTT+I+HPN+ +G +C+ IL +W P TV PN + P + A+ ++ ++ + + Sbjct: 36 TIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13 Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP+ YP PP V+FTT I+HPNV +G +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-------------SQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13 Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP+ YP PP V+FTT I+HPNV +G +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-------------SQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI GP +T+Y G + + FP++YP + P VKF T +HPNV G +C+ IL ++W ++ V PN+ESP N +AA W D++ ++KK Sbjct: 67 TIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK-EYKK 166 The following BLAST results are available for this feature:
BLAST of CB293516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293516 ID=CB293516; Name=CB293516; organism=Citrus sinensis; type=EST; length=869bpback to top |