CB293516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 41/115 (35.65%), Postives = 55/115 (47.83%), Query Frame = -2 Query: 521 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKV 865 I G T +EGG F M F +YP+SPP KF ++HPNVYP G VC+SIL D W P T++ PN + PA EA + R +++K+V Sbjct: 45 IPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRV 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GPP++ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 36 TIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQ 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.836e-13 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = -2 Query: 521 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKV 865 I G DT++EGG + M F ++P++PP KF ++HPNVYP G VC+S+L D W P +++ PN E PA EA + + R +++K+V Sbjct: 45 IPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRV 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT+I+HPN+ +G +C+ IL +W P TV PN + P E A ++ R+ + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 36/114 (31.58%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136 The following BLAST results are available for this feature:
BLAST of CB293516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293516 ID=CB293516; Name=CB293516; organism=Citrus sinensis; type=EST; length=869bpback to top |