CB293516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 36/114 (31.58%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 36/114 (31.58%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 36/114 (31.58%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 36/114 (31.58%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.678e-12 Identity = 40/114 (35.09%), Postives = 53/114 (46.49%), Query Frame = -2 Query: 524 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKK 865 I G T +EGG F M F +YP+SPP KF ++HPNVYP G VC+SIL D W P T+ PN + PA EA + R +++K+ Sbjct: 45 IPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITINQLFIGIQELLNEPNIQEPAQAEAYTIYCQNRVEYEKR 147
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 37/122 (30.33%), Postives = 56/122 (45.90%), Query Frame = -2 Query: 503 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 868 TI+GP D+ Y GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL ++W P T+ PN + P E A ++ R ++ R+ Sbjct: 36 TIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRK 144
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = -2 Query: 527 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 868 TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ + +C+ IL +W P T+ PN + P E A+ ++ RD + + Sbjct: 36 TIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 38/115 (33.04%), Postives = 56/115 (48.70%), Query Frame = -2 Query: 521 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKV 865 I G T +EGG + IM F +YP+ PP +F + +HPNVYP G VC+SIL+ D W P T++ +PN +SPA + ++++ KKV Sbjct: 45 IPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEAD-----------WKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKV 148
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 37/122 (30.33%), Postives = 56/122 (45.90%), Query Frame = -2 Query: 503 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 868 TI+GP D+ Y GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL ++W P T+ PN + P E A ++ R ++ R+ Sbjct: 36 TIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRK 144
BLAST of CB293516 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 35/113 (30.97%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 530 TIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFK 868 TI+GPP++ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ R ++ Sbjct: 36 TIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 135 The following BLAST results are available for this feature:
BLAST of CB293516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293516 ID=CB293516; Name=CB293516; organism=Citrus sinensis; type=EST; length=869bpback to top |