CB293525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2Z_MOUSE (Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus GN=Ube2z PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.669e-11 Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = -1 Query: 465 NAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR-----MFHPNIYADGSICLDILQN----QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARLFSENKREYNRRVR 782 +A+I GP DTP++GG F + DYP PP V+ ++ F+PN Y +G +CL IL WSP ++++L SIQSL+ + P N P + + + YN +R Sbjct: 134 HALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERH--PGDSKNYNECIR 247
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2Z_HUMAN (Ubiquitin-conjugating enzyme E2 Z OS=Homo sapiens GN=UBE2Z PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.669e-11 Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = -1 Query: 465 NAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR-----MFHPNIYADGSICLDILQN----QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARLFSENKREYNRRVR 782 +A+I GP DTP++GG F + DYP PP V+ ++ F+PN Y +G +CL IL WSP ++++L SIQSL+ + P N P + + + YN +R Sbjct: 132 HALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERH--PGDSKNYNECIR 245
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = -1 Query: 516 NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL-CDPNPNSPANSE 800 +N+ W + G T + T++L ++F E YP + P V FVS HP+IY++G ICLDIL + WSP V ++ SI S+L P PA+++ Sbjct: 41 DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADND 137
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 41/131 (31.30%), Postives = 66/131 (50.38%), Query Frame = -1 Query: 462 DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV-----SRMFHPNIYADGSICLDIL-------QNQWSP-IYDVAAILTSIQSLL--CDPNPNSPA--NSEAARLFSENKREYNRRVRE 803 + + + +I GP DTP+ G F+ + F +DYP+ PP V S F+PN+Y DG +CL IL + +W+P +L S+QSL+ +P N P S +++ REY+ +R+ Sbjct: 4575 EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 4705
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11 Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = -1 Query: 552 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 809 P + NI+ W+ VI GP DTP+DGG + TL F DYP KPP +R ++ PN + +CL D + W+P + VA IL + S + Sbjct: 29 PNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMIT----PNGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFM 115 The following BLAST results are available for this feature:
BLAST of CB293525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293525 ID=CB293525; Name=CB293525; organism=Citrus sinensis; type=EST; length=812bpback to top |