CB293525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.933e-24 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 465 NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 797 N+M W I G TPW+GG FKL + F +DYP+ PP +F +FHPN+Y G++CL IL+ W P + IL IQ LL +PN PA +EA ++ +N+ EY +RVR Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.830e-24 Identity = 53/120 (44.17%), Postives = 77/120 (64.17%), Query Frame = -1 Query: 450 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 809 P NI W I GP +T + G T++L+L F YP P V+F++ FHPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN SP N++AA ++++ K EY + + E+ Sbjct: 56 PDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK-EYKKYLDAFYEK 174
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.483e-23 Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = -1 Query: 483 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKRE 809 P ++N ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.235e-23 Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = -1 Query: 462 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 809 P +N + I GP D+P++GG F L L T+DYP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N++E R RE Sbjct: 27 PATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARARE 142
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.531e-23 Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = -1 Query: 483 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKRE 809 P ++N ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQ 135
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.531e-23 Identity = 48/117 (41.03%), Postives = 74/117 (63.25%), Query Frame = -1 Query: 462 APQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 812 +P + N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+ + N+ E +E Sbjct: 28 SPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKE 144
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.531e-23 Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = -1 Query: 483 APQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKRE 812 +P ++N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+ + N+ E Sbjct: 28 SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAE 137
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.223e-23 Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = -1 Query: 483 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKRE 809 P ++N ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.223e-23 Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = -1 Query: 483 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKRE 809 P ++N ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135
BLAST of CB293525 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.223e-23 Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = -1 Query: 483 PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKRE 809 P ++N ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135 The following BLAST results are available for this feature:
BLAST of CB293525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293525 ID=CB293525; Name=CB293525; organism=Citrus sinensis; type=EST; length=812bpback to top |