CB293541

Overview
NameCB293541
Unique NameCB293541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23
Identity = 63/175 (36.00%), Postives = 92/175 (52.57%), Query Frame = 2
Query:  215 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            + Y K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ + G+D+E+AYPY
Sbjct:   31 KTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENYGCGGGYMTNAFQYVQRNRGIDSEDAYPY 203          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 70/186 (37.63%), Postives = 95/186 (51.08%), Query Frame = 2
Query:  200 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRS--TNCKGLSYRLGLNKFADWSWEEFQRHRLGA---------AQNCSATTKGNHKLTADVLPETKDWRESGIVS--PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            +A +  +Y + Y S  +   RF  FS NL+ IR+   + +  +Y L LN+FAD S +EF    L           A N +   KG     A+V     DW ++  V    VK+QG CGSCW FS  G+LE        K   LS+Q LVDC+  ++N+GCNGG    AFEY+  D GL   + YPY
Sbjct:   26 YANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRVPKTAKLNASNANFQYKG-----AEV-----DWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVA-DNGLAEAKDYPY 200          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 63/175 (36.00%), Postives = 92/175 (52.57%), Query Frame = 2
Query:  215 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            + Y K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ + G+D+E+AYPY
Sbjct:   32 KTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPY 204          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = 2
Query:  215 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            + + K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ + G+D+E+AYPY
Sbjct:   31 KTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPY 203          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = 2
Query:  215 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            + + K Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +     D     P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ + G+D+E+AYPY
Sbjct:   31 KTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPY 203          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 2
Query:  440 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            DVLP++ DWRE G V PVK+QG CGSCW F    ++E       G  ISLS+QQLVDC+    N GC GG P +AF+YI  +GG+++EE YPY
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCST--RNHGCEGGWPYRAFQYIINNGGINSEEHYPY 91          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22
Identity = 64/181 (35.36%), Postives = 90/181 (49.72%), Query Frame = 2
Query:  218 RYGKIYESVEEMKLRFATFS--KNLDLIRSTNCKGLS-YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA-----------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            +Y K+Y   EE+  R       K ++L    N  G + Y + +N FAD + EEF+   +G       T K   K              D LP+  DWR  G V+ V+ QG C SCW F  TG++E    +  GK I LS Q L+DC++   N+GC  G    AF+Y+ ++GGL+ E  YPY
Sbjct:   35 KYEKLYSPEEEVLKRVVWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPY 215          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22
Identity = 63/172 (36.63%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  242 VEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL---------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            V+E+  R   + KNL  I   N +      +Y L +N   D + EE  +   G     S      H  + D L         P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ + G+D+E+AYPY
Sbjct:   41 VDEISRRLI-WEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS------HSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPY 203          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22
Identity = 64/181 (35.36%), Postives = 90/181 (49.72%), Query Frame = 2
Query:  194 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQN------CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            L F +F  +Y K Y+S +E K R+  F  N++ I   N +  S    +N+FAD    E      G A        C               P + DWR    ++ VKDQG CG+CW F++ G+LE+ Y   + + I LS+QQLVDC   F + GC+GGL   A+E I   GG++ E  Y Y
Sbjct:   38 LYFEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIRHTGLASGELGLNFCETIVVDGPAQRQR--PVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDC--DFVDMGCDGGLIHTAYEQIMKMGGVEQEFDYSY 214          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22
Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 2
Query:  440 DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            D LP++ DWRE+G V PVK+QG CGSCW FST  ++E       G  ISLS+QQLVDC  A  N GC GG  + AF++I  +GG+++EE YPY
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVNNGGINSEETYPY 91          
The following BLAST results are available for this feature:
BLAST of CB293541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATK_RABIT4.479e-2336.00Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATL2_PARTE5.850e-2337.63Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATK_PIG5.850e-2336.00Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_MACMU5.850e-2335.43Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA5.850e-2335.43Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CPGP1_ZINOF2.223e-2253.76Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATQ_RAT2.223e-2235.36Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_HUMAN2.223e-2236.63Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATV_NPVSE2.903e-2235.36Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CPGP2_ZINOF3.792e-2253.76Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bb02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bb02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293541 ID=CB293541; Name=CB293541; organism=Citrus sinensis; type=EST; length=720bp
GCACTATGCATTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGACA
TCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTC
GACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTT
CGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCT
TTGCCCGTTTTGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAG
ATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATC
TACCAATTGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTG
ACTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAAC
TGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCC
AGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACC
AAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAG
GCTGCTTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAAAACAGCA
GCTTGTAGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGT
TGCCATCCCAAGCCTTTGAATACATCAAGTACGATGGTGGCCTTGATACT
GAGGAAGCATATCCCTACAC
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