CB293541

Overview
NameCB293541
Unique NameCB293541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:138..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31
Identity = 77/184 (41.85%), Postives = 107/184 (58.15%), Query Frame = 2
Query:  191 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYDGGLDTEEAYPY 718
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A  + +SLS+QQLV C     N GC+GGL  QAF+++    +G L TE++YPY
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDM--NDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPY 216          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31
Identity = 77/184 (41.85%), Postives = 107/184 (58.15%), Query Frame = 2
Query:  191 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYDGGLDTEEAYPY 718
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A  + +SLS+QQLV C     N GC+GGL  QAF+++    +G L TE++YPY
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDM--NDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPY 216          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31
Identity = 77/189 (40.74%), Postives = 107/189 (56.61%), Query Frame = 2
Query:  197 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--------LTADVLPETK--DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            S+  F  ++G+ Y  +EE + R   F  NL  I   N K     ++Y L +N+F+D + E+F           +A  KG  K         + D  PE+   DWR  G V+PVKDQG CGSCW FSTTG +E  +    G+ +SLS+QQLVDCA  ++ NQGCNGG   +A  Y++ +GG+DTE +YPY
Sbjct:   19 SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-----------NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPY 196          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31
Identity = 76/177 (42.94%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  200 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            F  +  +Y K Y S +E   RF  F     +I + N K  SY+LG+N +AD S +EF  + L   +    +  G   +  D     +P T DWR    V+PVKDQG CGSCWTF +TGSLE       G+ +SLS+QQLVDCA    +QGC GG  S AF+Y+   G L TE  YPY
Sbjct:  225 FKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEF--NTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPY 399          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.536e-31
Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  203 ARFARRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            A   R YG     + E + R A + KN   +DL      +G   +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +SLS+Q LVDC++A  NQGCNGGL   AF+YIK +GGLD+EE+YPY
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPY 204          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31
Identity = 77/183 (42.08%), Postives = 103/183 (56.28%), Query Frame = 2
Query:  209 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEF---------QRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            F  ++GK Y + EE   R + F   L  I+  N    KG ++Y L +N F+D + EE          +RH L      + TT     + ADV     DWR  G V+PVKDQG CGSCW FS   +LE A+    G  +SLS+Q LVDC+ ++ NQGCNGG P QA++YI  + G+DTE +YPY
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSAPTTP----MAADV-----DWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPY 196          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.469e-31
Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = 2
Query:  209 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            F   + K Y+   E + R   F++N   I   N +     +S++L +NK+AD    EF++   G         +   +    V         LP++ DWR  G V+ VKDQGHCGSCW FS+TG+LE  + +  G  +SLS+Q LVDC+  + N GCNGGL   AF YIK +GG+DTE++YPY
Sbjct:   62 FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 244          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31
Identity = 70/162 (43.21%), Postives = 99/162 (61.11%), Query Frame = 2
Query:  248 EMKLRFATFSKNLDLIRSTNCKGLS---YRLGLNKFADWSWEEFQRHRLGA--AQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            E + RF  F  NL  + + N +      +RLG+N+FAD + EEF+   LGA  A+   A  +       + LPE+ DWRE G V+PVK+QG CGSCW FS   ++E+      G+ I+LS+Q+LV+C+    N GCNGGL   AF++I  +GG+DTE+ YPY
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPY 231          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 69/178 (38.76%), Postives = 98/178 (55.06%), Query Frame = 2
Query:  197 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            S+  F  +YG+ Y   +E   R   F +N  LI   N K     +++++ +N+F D + EEF     G  +      K      A  +    DWR   +V+PVKDQ  CGSCW FS TG+LE  +     + +SLS+QQLVDC+  + N GC GG  + AF+YIK +GG+DTE +YPY
Sbjct:   19 SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPY 196          
BLAST of CB293541 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 73/176 (41.48%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  203 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSKQQLVDCAQAFNNQGCNGGLPSQAFEYIKYDGGLDTEEAYPY 718
            A   R YG     + E   R A + KN+ +I   N +       + + +N F D + EEF++   G         K   +     +P++ DWRE G V+PVK+QG CGSCW FS TG+LE    +  GK +SLS+Q LVDC++A  N+GCNGGL   AF Y+K +GGLD+EE+YPY
Sbjct:   34 ATHRRLYG-----MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPY 204          
The following BLAST results are available for this feature:
BLAST of CB293541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
LMCPB_LEIME1.176e-3141.85Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.176e-3141.85Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CYSP1_HOMAM1.176e-3140.74Digestive cysteine proteinase 1 OS=Homarus america... [more]
CFAD_DICDI1.176e-3142.94Counting factor associated protein D OS=Dictyostel... [more]
CATL1_BOVIN1.536e-3143.18Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CRUST_PANBO3.421e-3142.08Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATL_DROME4.469e-3139.34Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
ORYB_ORYSJ7.622e-3143.21Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP3_HOMAM9.955e-3138.76Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL1_CANFA9.955e-3141.48Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bb02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bb02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293541 ID=CB293541; Name=CB293541; organism=Citrus sinensis; type=EST; length=720bp
GCACTATGCATTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGACA
TCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTC
GACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTT
CGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCT
TTGCCCGTTTTGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAG
ATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATC
TACCAATTGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTG
ACTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAAC
TGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCC
AGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACC
AAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAG
GCTGCTTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAAAACAGCA
GCTTGTAGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGT
TGCCATCCCAAGCCTTTGAATACATCAAGTACGATGGTGGCCTTGATACT
GAGGAAGCATATCCCTACAC
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