CB293550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 S SELAC Y+ LILHDD + +T DKI L+KAA V +E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_DROME (60S acidic ribosomal protein P1 OS=Drosophila melanogaster GN=RpLP1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 44/108 (40.74%), Postives = 54/108 (50.00%), Query Frame = -3 Query: 234 SELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 554 +ELAC YA LIL DD +A+T +KI ++KAANV +E YWP LFAK LE N+ DLI N +SD+DMGF LFD Sbjct: 5 AELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 S SELAC Y+ LILHDD + +T DKI L+KAA V +E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 S SELAC Y+ LILHDD + +T DKI L+KAA V +E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_BOVIN (60S acidic ribosomal protein P1 OS=Bos taurus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 S SELAC Y+ LILHDD + +T DKI L+KAA V +E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_DICDI (60S acidic ribosomal protein P1 OS=Dictyostelium discoideum GN=rplp1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12 Identity = 39/110 (35.45%), Postives = 54/110 (49.09%), Query Frame = -3 Query: 234 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEDMGFSLFD 563 + ELAC Y+ L+L DDGI IT DKI L++AAN+ + S+WP L+A+ L K N+ +L++N ESD+DMG LFD Sbjct: 4 IKTEELACIYSGLLLQDDGIEITADKIKTLLEAANITVASHWPGLYARSLAKVNIPELLLNAGSSGAAGAAPVAAATSAAAPAAAAKKETKKEEVKKEESDDDMGMGLFD 113
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_OSCBR (60S acidic ribosomal protein P1 OS=Oscheius brevesophaga GN=rpl-21 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = -3 Query: 387 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLI 560 S ELAC YA LIL DD +AIT DKIA L+KAAN+ E +WP LFAK LE ++ +LI Sbjct: 3 SPQELACVYAALILQDDEVAITGDKIATLLKAANIEFEPFWPGLFAKALEGVDVKNLI 60
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_CHICK (60S acidic ribosomal protein P1 OS=Gallus gallus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 S SELAC Y+ LILHDD + +T DKI L+KAA V +E +WP LFAK L ++ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_PIG (60S acidic ribosomal protein P1 OS=Sus scrofa GN=RPLP1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 S SELAC Y+ LILHDD + + DKI L+KAA V +E +WP FAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVPEDKINALIKAAGVNVEPFWPGFFAKALANVNIGSLICN 62
BLAST of CB293550 vs. ExPASy Swiss-Prot
Match: RLA1_POLPE (60S acidic ribosomal protein P1 OS=Polyorchis penicillatus PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = -3 Query: 381 SASELACTYACLILHDDGIAITTDKIAQLVKAANVFIESYWPSLFAKLLEKRNLDDLIMN 560 S SELAC Y+ LILHDD AIT +K+ +++ AANV +E YWP LFA LE +N+ DLI N Sbjct: 5 STSELACVYSALILHDD--AITAEKMNKIISAANVNVEPYWPGLFA--LEGKNIGDLICN 60 The following BLAST results are available for this feature:
BLAST of CB293550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293550 ID=CB293550; Name=CB293550; organism=Citrus sinensis; type=EST; length=631bpback to top |