CB293551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA3_SCHPO (60S acidic ribosomal protein P1-alpha 3 OS=Schizosaccharomyces pombe GN=rpa3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12 Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 1 Query: 70 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 252 MSASELA +Y+ LIL D+GI IT+DK+ L KAANV +E W ++FAK LE ++L +L++N Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLN 61
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_SCHPO (60S acidic ribosomal protein P1-alpha 1 OS=Schizosaccharomyces pombe GN=rpa1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12 Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 1 Query: 70 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 252 MSASELA +Y+ LIL D+GI IT+DK+ L KAANV +E W ++FAK LE ++L +L++N Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLN 61
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA5_SCHPO (60S acidic ribosomal protein P1-alpha 5 OS=Schizosaccharomyces pombe GN=rpa5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.898e-12 Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 70 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 252 MSASELA +YA LIL D+GI IT+DK+ L KA NV +E W ++FAK LE ++L +L++N Sbjct: 1 MSASELATSYAALILADEGIEITSDKLLSLTKAGNVEVEPIWATIFAKALEGKDLKELLLN 61
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_CHICK (60S acidic ribosomal protein P1 OS=Gallus gallus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.898e-12 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 73 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 252 S SELAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L ++ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICN 62
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_OSCBR (60S acidic ribosomal protein P1 OS=Oscheius brevesophaga GN=rpl-21 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.785e-12 Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 73 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLI 246 S ELAC YA LIL DD +AIT DKIA L+KAAN+ E +WP LFAK LE ++ +LI Sbjct: 3 SPQELACVYAALILQDDEVAITGDKIATLLKAANIEFEPFWPGLFAKALEGVDVKNLI 60
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_CAEEL (60S acidic ribosomal protein P1 OS=Caenorhabditis elegans GN=rla-1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.785e-12 Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 73 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLI 246 S ELAC YA LIL DD +AIT +KIA L+KAANV E YWP LFAK LE ++ +LI Sbjct: 3 SNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLI 60
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_PIG (60S acidic ribosomal protein P1 OS=Sus scrofa GN=RPLP1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 73 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 252 S SELAC Y+ LILHDD + + DKI L+KAA V++E +WP FAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVPEDKINALIKAAGVNVEPFWPGFFAKALANVNIGSLICN 62
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_POLPE (60S acidic ribosomal protein P1 OS=Polyorchis penicillatus PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 73 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 252 S SELAC Y+ LILHDD AIT +K+ +++ AANV++E YWP LFA LE +N+ DLI N Sbjct: 5 STSELACVYSALILHDD--AITAEKMNKIISAANVNVEPYWPGLFA--LEGKNIGDLICN 60
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_DICDI (60S acidic ribosomal protein P1 OS=Dictyostelium discoideum GN=rplp1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.438e-11 Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 70 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 252 + ELAC Y+ L+L DDGI IT DKI L++AAN+++ S+WP L+A+ L K N+ +L++N Sbjct: 4 IKTEELACIYSGLLLQDDGIEITADKIKTLLEAANITVASHWPGLYARSLAKVNIPELLLN 64
BLAST of CB293551 vs. ExPASy Swiss-Prot
Match: RLA1_ASPFU (60S acidic ribosomal protein P1 OS=Aspergillus fumigatus GN=AFUA_1G06830 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.204e-11 Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 70 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVS-IESYWPSLFAKLLEKRNLDDLIMN 252 MS +ELAC+YA LIL DDG+ IT DKI L+ AA V+ +E W SLFAK LE +++ DL+ N Sbjct: 1 MSTAELACSYAALILADDGVEITADKIQTLLGAAKVADVEPIWTSLFAKALEGKDIKDLLTN 62 The following BLAST results are available for this feature:
BLAST of CB293551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293551 ID=CB293551; Name=CB293551; organism=Citrus sinensis; type=EST; length=640bpback to top |