CB293558

Overview
NameCB293558
Unique NameCB293558
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50
Identity = 95/143 (66.43%), Postives = 121/143 (84.62%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            +DK+M   VV+GS   TG +I+TT+GG++G+PKQTISYMA+RVVGTGSFG+VFQAKCLETGE VAIKKVLQD+RYKNRELQ+MR+ DHPNV+ L+H FFSTT K+EL+LNLV+EYVPE++YR  KH  +  +++ P I  +LY
Sbjct:  101 EDKDMETTVVNGSGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLVLEYVPETVYRASKHYTK-MNQHMPIIFVQLY 242          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 5.737e-50
Identity = 93/143 (65.03%), Postives = 121/143 (84.62%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            +DK+M   +V+G    TG +I+TT+GG++G+PKQTISYMA+RVVGTGSFG+VFQAKCLETGE VAIKKVLQD+RYKNRELQ+MR+ DHPNV+ L+H FFSTT K+EL+LNLV+E+VPE++YR LKH  +  +++ P I  +LY
Sbjct:   97 EDKDMEPPIVNGCGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLVLEFVPETVYRALKHYTK-MNQHMPIILVQLY 238          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.305e-45
Identity = 74/125 (59.20%), Postives = 103/125 (82.40%), Query Frame = -2
Query:   84 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLK 458
            D+++    ++DG+    GH+I TT+ G+NG+ +QT+SY++E VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+++DHPN ++LKH FFS T   E++LNLV+E+VPE++ RV +
Sbjct:   46 DERDSEPDIIDGAGAEPGHVIRTTLRGRNGQSRQTVSYISEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNAVALKHSFFSRTDNEEVYLNLVLEFVPETVNRVAR 170          

HSP 2 Score: 36.5798 bits (83), Expect = 1.305e-45
Identity = 18/24 (75.00%), Postives = 18/24 (75.00%), Query Frame = -3
Query:    5 SSANQRMPLIYVKGYTYQIFRGLA 76
            S  NQ MPLIYVK YTYQI R LA
Sbjct:  173 SRTNQLMPLIYVKLYTYQICRALA 196          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.217e-45
Identity = 73/125 (58.40%), Postives = 102/125 (81.60%), Query Frame = -2
Query:   84 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLK 458
            ++++    ++DG     GH+I+TT+ G+NG+ +QT+SY+AE VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+++DHPNV+ LKH F+S T   E++LNLV+E+VPE++ R  +
Sbjct:   45 EERDSEPDIIDGVGAEPGHVITTTLPGRNGQSRQTVSYIAEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNVVCLKHSFYSRTENEEVYLNLVLEFVPETVNRTAR 169          

HSP 2 Score: 38.5058 bits (88), Expect = 2.217e-45
Identity = 19/24 (79.17%), Postives = 19/24 (79.17%), Query Frame = -3
Query:    5 SSANQRMPLIYVKGYTYQIFRGLA 76
            S  NQ MPLIYVK YTYQI RGLA
Sbjct:  172 SRMNQLMPLIYVKLYTYQICRGLA 195          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.393e-43
Identity = 77/120 (64.17%), Postives = 98/120 (81.67%), Query Frame = -2
Query:   93 KEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYR 452
            ++M   ++ G+   +G II+T   G N +  +TISY AE V+GTGSFG+VFQAKCLET E VAIKKVLQD+RYKNRELQ+MR++DHPNV+ LKH FFSTT K+EL+LNLV+EYVPE++YR
Sbjct:   67 EDMDCGIIKGNGTESGRIITTKKKGLNDQKDKTISYRAEHVIGTGSFGVVFQAKCLETEEKVAIKKVLQDKRYKNRELQIMRMLDHPNVVELKHSFFSTTEKDELYLNLVLEYVPETIYR 186          

HSP 2 Score: 31.9574 bits (71), Expect = 3.393e-43
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = -3
Query:    8 NQRMPLIYVKGYTYQIFRGL 67
            NQ MPLIY++ YTYQI R +
Sbjct:  195 NQHMPLIYIQLYTYQICRAM 214          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.029e-29
Identity = 57/106 (53.77%), Postives = 82/106 (77.36%), Query Frame = -2
Query:   66 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKH*QQCK 380
            G+  E  Q ++Y   +V+G GSFG+V+QA+  ET E VAIKKVLQD+R+KNRELQ+MR +DH N++ L++ F+S+   K+EL+LNLV+EYVPE++YRV +H  + K
Sbjct:  108 GQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAK 213          

HSP 2 Score: 30.0314 bits (66), Expect = 2.029e-29
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = -3
Query:    5 MPLIYVKGYTYQIFRGLA 58
            +P+IYVK Y YQ+FR LA
Sbjct:  216 IPIIYVKVYMYQLFRSLA 233          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: GSK3A_HUMAN (Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.029e-29
Identity = 57/106 (53.77%), Postives = 82/106 (77.36%), Query Frame = -2
Query:   66 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKH*QQCK 380
            G+  E  Q ++Y   +V+G GSFG+V+QA+  ET E VAIKKVLQD+R+KNRELQ+MR +DH N++ L++ F+S+   K+EL+LNLV+EYVPE++YRV +H  + K
Sbjct:  108 GQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAK 213          

HSP 2 Score: 30.0314 bits (66), Expect = 2.029e-29
Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = -3
Query:    5 SSANQRMPLIYVKGYTYQIFRGLA 76
            + A   +P++YVK Y YQ+FR LA
Sbjct:  210 TKAKLTIPILYVKVYMYQLFRSLA 233          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 3.439e-29
Identity = 57/106 (53.77%), Postives = 82/106 (77.36%), Query Frame = -2
Query:   66 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKH*QQCK 380
            G+  E  Q ++Y   +V+G GSFG+V+QA+  ET E VAIKKVLQD+R+KNRELQ+MR +DH N++ L++ F+S+   K+EL+LNLV+EYVPE++YRV +H  + K
Sbjct:  108 GQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAK 213          

HSP 2 Score: 29.261 bits (64), Expect = 3.439e-29
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = -3
Query:    5 PLIYVKGYTYQIFRGLA 55
            P+IY+K Y YQ+FR LA
Sbjct:  217 PIIYIKVYMYQLFRSLA 233          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.172e-28
Identity = 64/135 (47.41%), Postives = 98/135 (72.59%), Query Frame = -2
Query:   27 DGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLYV 428
            DGS   T  +++T   G+  +  Q +SY   +V+G GSFG+V+QAK  ++GE VAIKKVLQD+R+KNRELQ+MR +DH N++ L++ F+S+   K+E++LNLV++YVPE++YRV +H  + K +  P I  +LY+
Sbjct:   33 DGSKVTT--VVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVKLYM 162          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.172e-28
Identity = 64/135 (47.41%), Postives = 98/135 (72.59%), Query Frame = -2
Query:   27 DGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFST-TSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLYV 428
            DGS   T  +++T   G+  +  Q +SY   +V+G GSFG+V+QAK  ++GE VAIKKVLQD+R+KNRELQ+MR +DH N++ L++ F+S+   K+E++LNLV++YVPE++YRV +H  + K +  P I  +LY+
Sbjct:   33 DGSKVTT--VVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-QTLPVIYVKLYM 162          
The following BLAST results are available for this feature:
BLAST of CB293558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
KSG8_ARATH1.510e-5066.43Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA5.737e-5065.03Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG10_ARATH1.305e-4559.20Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG4_ARATH2.217e-4558.40Shaggy-related protein kinase delta OS=Arabidopsis... [more]
KSG2_ARATH3.393e-4364.17Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
GSK3A_RAT2.029e-2953.77Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]
GSK3A_HUMAN2.029e-2953.77Glycogen synthase kinase-3 alpha OS=Homo sapiens G... [more]
GSK3A_MOUSE3.439e-2953.77Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
GSK3B_RAT6.172e-2847.41Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3B_MOUSE6.172e-2847.41Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bc02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bc02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293558 ID=CB293558; Name=CB293558; organism=Citrus sinensis; type=EST; length=630bp
ATGTAGCCAGGCCCCTGAAAATCTGGTACGTATAACCTTTCACATATATG
AGGGGCATTCTCTGATTTGCACTGCTGCTAATGCTTCAAAACCCTATACA
TGCTCTCTGGTACGTATTCCATAACCAAGTTGAGGAAAAGTTCGTTTTTA
CTGGTAGTTGAAAAGAAACAATGCTTCAAAGAAATCACATTTGGATGATC
CATCACCCGCATTAACTGCAGTTCACGATTCTTATATCTTCTGTCCTGCA
AAACCTTCTTGATAGCCACAGTCTCTCCAGTTTCCAAGCATTTAGCCTGG
AAGACAATACCAAATGACCCAGTTCCCACAACACGCTCCGCCATGTAGCT
AATAGTCTGTTTTGGCTCTCCATTTTTGCCTCCAATGGTGGTGGAAATGA
TGTGACCAGTGACATGGTCACTCCCATCAACAACAGCAGCAGACATCTCC
TTATCGTCGGCCATGGGGAGATTTGGAGAGAAATTGGGGTGAAGAAAGAG
AGGGAGGGAGAGAGAGAGAGAGAGAGAGCGATGGAAGAGAAATGGAGAAA
TTTCAACGGTGGATGAGGGAGAAGATGATGATCATGGTGTGGCGATGGAG
AATGAGAGAAAGGAGGACCCAAGCCTCGTG
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