CB293586

Overview
NameCB293586
Unique NameCB293586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.889e-87
Identity = 153/197 (77.66%), Postives = 173/197 (87.82%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVALCQ+IDLRHLEENL++TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+VFAYIDDPCSATYPLMQKLR+VL+EHAL NGE+EK A++SIFQKI AFEEELK +LPKEVE+AR  +E G+  +PNRI ECRSYPLY+ VREELG  +LTGEKV SPGEE DKVF A+CQGKIIDP+L CL  WNGA
Sbjct:   34 FLVALCQSIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLREVLIEHALTNGESEKNASTSIFQKIGAFEEELKALLPKEVESARSAIEGGNAAVPNRIAECRSYPLYKFVREELGGEYLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGWNGA 230
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 5.079e-87
Identity = 151/197 (76.65%), Postives = 175/197 (88.83%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLV LCQAIDLRHLEENLK TVKNTVS VAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQ LVEHAL NG+NE+  ++SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+ VR+ELG  +LTGEKVTSPGEEF+KVF AM +G+IIDP+LECL  WNGA
Sbjct:  515 FLVGLCQAIDLRHLEENLKSTVKNTVSSVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRQTLVEHALKNGDNERNLSTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGA 711
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 320.087 bits (819), Expect = 8.663e-87
Identity = 155/197 (78.68%), Postives = 172/197 (87.31%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRHLEENL++ VKNTVSQVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DD CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+P I NRIKECRSYPLYR VR ELG   LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGA
Sbjct:  511 YLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGTNGELHPSRFCEKDLLRVVDREYVFAYADDACSANYPLMQKLRQVLVDHALQNGENEKNANSSIFQKILAFEDELKAVLPKEVESARAALESGNPAIANRIKECRSYPLYRFVRGELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGA 707
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.520e-86
Identity = 155/197 (78.68%), Postives = 171/197 (86.80%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVALCQAIDLRHLEENLK+TVKN VSQVAK+ LT G +GELHPSRFCEK LLK  +RE+ FAYIDDPCS TYPLMQKLRQVLV++AL NGENEK  N+SIFQKIA+FEEELKT+LPKEVE AR   EN    IPN+IK+CRSYPLY+ VREELG + LTGEKV SPGEE DKVF+AMCQGKIIDP+LECL EWNGA
Sbjct:  511 FLVALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKALLKVVEREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNLNTSIFQKIASFEEELKTLLPKEVEGARLAYENDQCAIPNKIKDCRSYPLYKFVREELGTSLLTGEKVISPGEECDKVFSAMCQGKIIDPLLECLGEWNGA 707
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 2.520e-86
Identity = 153/197 (77.66%), Postives = 170/197 (86.29%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FL+ LCQAIDLRHLEENLK +VKNTVSQV+K+ LT G +GELHPSRFCEKDLLK  DRE+VF+YIDDP S TYPLMQKLRQVLV+HAL N ENEK  N+SIFQKIA FEEELKT+LPKEVE+ R   E+G   IPN+IKECRSYPLY+ VREELG   LTGEKV SPGEEFDK+FTA+CQGKIIDP+LECL EWNGA
Sbjct:  305 FLMGLCQAIDLRHLEENLKSSVKNTVSQVSKRTLTTGGNGELHPSRFCEKDLLKVVDREYVFSYIDDPYSGTYPLMQKLRQVLVDHALINAENEKDVNTSIFQKIATFEEELKTILPKEVESTRAAYESGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVKSPGEEFDKLFTAICQGKIIDPLLECLGEWNGA 501
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 3.292e-86
Identity = 150/197 (76.14%), Postives = 173/197 (87.82%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRHLEENLK+ VKNTVSQVAKK L +GA+GELHP+RFCEK+LL+  +RE++F Y DDPCS+TYPLMQKLRQVLV+HA+ NGE+EK  NSSIFQKI AFE+ELK VLPKEVE+AR  VE+G+P IPNRI ECRSYPLYRLVR+E+G   LTGEKV SPGEE DKVFTA C G+IIDP+LECL+ WNGA
Sbjct:  520 YLVALCQAIDLRHLEENLKNAVKNTVSQVAKKTLAMGANGELHPARFCEKELLQVVEREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNLNSSIFQKIVAFEDELKAVLPKEVESARAVVESGNPAIPNRITECRSYPLYRLVRQEVGTELLTGEKVRSPGEEIDKVFTAFCNGQIIDPLLECLKSWNGA 716
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.634e-85
Identity = 149/197 (75.63%), Postives = 171/197 (86.80%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVALCQAIDLRH+EENLK  VKNTVSQVAK+VLTVG +GELHPSRFCEKDLL   +RE+VFAYIDDPCSATYPLMQKLR VLV+HAL NG+ E  +++SIFQKI AFE+ELKT+LPKEVE+ R  VENG+P +PNRI ECRSYPLY+ VRE LG + LTGEK+ SPGEE DKVF A+C G+ IDPML+CL+EWNGA
Sbjct:  517 FLVALCQAIDLRHIEENLKSVVKNTVSQVAKRVLTVGVNGELHPSRFCEKDLLNVVEREYVFAYIDDPCSATYPLMQKLRHVLVDHALENGDREGNSSTSIFQKIGAFEQELKTLLPKEVESVRVDVENGNPAVPNRIIECRSYPLYKFVRENLGTSLLTGEKIRSPGEECDKVFAALCDGRFIDPMLDCLKEWNGA 713
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.134e-85
Identity = 149/197 (75.63%), Postives = 172/197 (87.31%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+GA GELHP+RFCEK+LL+  DRE++F Y DDPCS+TYPLMQKLRQVLV+HA+ NGE+EK  NSSIFQKI AFE+EL  VLPKEVE+AR  +E+G+P+IPNRI ECRSYPLYRLVR+ELG   LTGEKV SPGEE +KVFTAMC G+I DP+LECL+ WNGA
Sbjct:  519 YLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTIGAIGELHPARFCEKELLRVVDREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNINSSIFQKIGAFEDELNAVLPKEVESARALLESGNPSIPNRITECRSYPLYRLVRQELGTELLTGEKVRSPGEEIEKVFTAMCNGQINDPLLECLKSWNGA 715
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.640e-85
Identity = 151/197 (76.65%), Postives = 175/197 (88.83%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLV LC ++DLRH+EENLK+TVK +VSQ+ + VLT+G +GELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPLMQKLRQVLVEHAL NGE  + + +SIFQKI +FEEELKT+LPKEVE+AR  VENG+P IPNRIKECRSYPLY+ VREELG + LTGEKV SPGEEFDKVFTA+C GK+IDP+LECL+EW+GA
Sbjct:  510 FLVGLCHSVDLRHIEENLKNTVKISVSQLPR-VLTMGFNGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLMQKLRQVLVEHALVNGEKVRNSTTSIFQKIGSFEEELKTLLPKEVESARLEVENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSPGEEFDKVFTAICAGKLIDPLLECLKEWDGA 705
[Close]
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 4.753e-85
Identity = 149/197 (75.63%), Postives = 170/197 (86.29%), Query Frame = -3 
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRHLEENLK+ V+NTV+QVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DDPCSA YPL QKLRQVLV+HAL NGE+EK  ++SIFQKIAAFE+ELK VLPKEVE AR  +ENG+P IPNRI ECRSYPLY+ VREELG   LTGEKV SPGE  DKVFTA+C G IIDP+LECL+ W+GA
Sbjct:  507 YLVALCQAIDLRHLEENLKNAVRNTVNQVAKRTLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCSANYPLFQKLRQVLVDHALQNGEHEKNVSTSIFQKIAAFEDELKAVLPKEVEGARSAIENGNPAIPNRITECRSYPLYKFVREELGTEMLTGEKVKSPGEVCDKVFTAVCDGGIIDPLLECLKSWDGA 703
The following BLAST results are available for this feature:
BLAST of CB293586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PALY_MALDO3.889e-8777.66Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PAL1_PETCR5.079e-8776.65Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL2_TOBAC8.663e-8778.68Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_PHAVU2.520e-8678.68Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_PHAVU2.520e-8677.66Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PAL5_SOLLC3.292e-8676.14Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL2_CICAR1.634e-8575.63Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_SOLTU2.134e-8575.63Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PAL2_POPKI3.640e-8576.65Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL2_IPOBA4.753e-8575.63Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bd07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bd07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293586 ID=CB293586; Name=CB293586; organism=Citrus sinensis; type=EST; length=782bp
TTTTTTTTTTTTTTATAAAGGACAATAAGTCTTATAACCTTATATGAAAA
AACCAATAGAAGTGATTGAAATATTACAGATGAATTTGTACCACTGACTC
GCATGGGCAAATTCTATGAACACAAGAACACAAGGGATTGAAGACCGTGT
TATTAAACAAAATAAAAACAACTAACAAATTGGAAGAGGGGCGCCATTCC
ATTCCCTGAGACATTCCAGCATTGGATCAATGATCTTGCCCTGGCACATT
GCTGTAAACACTTTGTCAAATTCCTCGCCGGGCGATGTAACTTTTTCCCC
TGTTAGAAAATTAAACCCGAGCTCCTCCCTCACTAACCTGTACAAAGGGT
AAGACCTGCATTCTTTGATCCTGTTGGGAATTGTTGGACTTCCATTCTCA
ACAGTCTGCCTGGCGTTCTCAACTTCTTTGGGCAAAACGGTTTTCAATTC
CTCCTCAAAGGCTGCAATCTTCTGGAAGATTGAAGAGTTGGCAGTCTTCT
CGTTCTCTCCATTGTTCAGTGCGTGCTCAACAAGTACTTGCCTTAGCTTT
TGCATCAATGGATAGGTAGCACTGCAGGGGTCATCAATGTATGCAAAGAC
GTGTTCGCGATCAGCCGCTTTGAGCAGATCCTTCTCACAGAATCTTGATG
GATGAAGCTCTCCACTAGCACCGACGGTTAAGACTTTCTTAGCTACTTGG
CTGACAGTATTCTTGACTGTATGCTTCAAATTCTCCTCCAAATGTCTCAA
ATCAATAGCCTGGCAAAGCGCTACCAAGAATG
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