CB293586

Overview
NameCB293586
Unique NameCB293586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2871 contig Csv1_Contig2871:418..1199. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.208e-85
Identity = 150/197 (76.14%), Postives = 171/197 (86.80%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLV LCQA+DLRHLEENLK+ VKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAY DDPCS+TYPLMQKLR V+VEHALNNG  EK +N+SIFQKI++FE ELK  LPKEVE AR   ENGSP I NRIK+CRSYPLY+ V+ E+G  FLTGEKV SPGEEFDKVF A+C+GK IDPML+CL+EWNGA
Sbjct:  503 FLVGLCQAVDLRHLEENLKNAVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVIDREYVFAYADDPCSSTYPLMQKLRAVIVEHALNNGVKEKDSNTSIFQKISSFENELKAALPKEVEAARAEFENGSPAIENRIKDCRSYPLYKFVK-EVGSGFLTGEKVVSPGEEFDKVFNAICEGKAIDPMLDCLKEWNGA 698          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 8.108e-85
Identity = 150/197 (76.14%), Postives = 171/197 (86.80%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRHLEENL+ +VKNT+SQVAK+ LT G +GELHPSRFCE DLL+  DRE+VFAY+DDPCSATYPLMQKLRQVLVEHAL NGENEK A++SIFQKI AFE ELK VLPKEVE+AR  +E+G P I NRI ECRSYPLY+ +REELG NFLTGEKV SPGEE D+VFTAM +G I+DP+L+CL  WNGA
Sbjct:  512 YLVALCQAIDLRHLEENLRLSVKNTISQVAKRTLTTGVNGELHPSRFCELDLLRVVDREYVFAYVDDPCSATYPLMQKLRQVLVEHALKNGENEKNASTSIFQKIEAFEAELKAVLPKEVESARVALEDGKPAIANRITECRSYPLYKFIREELGTNFLTGEKVMSPGEECDRVFTAMSKGLIVDPLLKCLEGWNGA 708          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.359e-84
Identity = 152/197 (77.16%), Postives = 173/197 (87.82%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSRFCEKDLLK  DRE+VF YIDDPCSATYPLMQKLRQVLV+HAL NGE E+ +++SIFQKI AFEEELK +LPKEVE+AR  +ENG+P IPNRI + RSYPLY+ VREELG   LTGEKV SPGEEFDKVFTA+C GK+IDP    L+EWNGA
Sbjct:  370 WLVALCQAIDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRFCEKDLLKVVDREYVFTYIDDPCSATYPLMQKLRQVLVDHALMNGEKEQNSSTSIFQKIGAFEEELKILLPKEVESARLELENGNPAIPNRITDRRSYPLYKFVREELGTVLLTGEKVGSPGEEFDKVFTAICAGKLIDPCWSVLKEWNGA 566          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 4.024e-84
Identity = 149/197 (75.63%), Postives = 169/197 (85.79%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLR LEENL++ VKN V+QVAK+ LTVGA+GELHP+RFCEKDLL+  DRE+VFAY DDPCSA YPLMQKLRQ LV+HAL NGENEK   +SIF K+AAFE+ELK VLPKEVE AR  VE+G+P IPNRIKECRSYPLY+ VRE LG   LTGEKV SPGEE DKVFTAMC+G IIDP+LECL+ W+GA
Sbjct:  506 YLVALCQAIDLRFLEENLRNAVKNAVTQVAKRTLTVGANGELHPARFCEKDLLRVVDREYVFAYADDPCSANYPLMQKLRQALVDHALQNGENEKNTGTSIFLKVAAFEDELKAVLPKEVEAARIAVESGNPAIPNRIKECRSYPLYKFVREGLGTELLTGEKVRSPGEECDKVFTAMCEGSIIDPLLECLKSWDGA 702          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.449e-83
Identity = 149/197 (75.63%), Postives = 167/197 (84.77%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVALCQAIDLRHLEENLK  VK TVS VAK+ LTV  +GELHPSRF EKDLL   DRE++F+YIDDPC ATYPLMQKLR  LVEHAL NGE E++AN+SIF KIAAFEEELKT+LPKEV+NAR  +ENG   IPNRIKECRSYPLYR VREELG + LTGEK+ SPGEE  KVF A+C GK++DP+LECL+EWNGA
Sbjct:  509 FLVALCQAIDLRHLEENLKIVVKTTVSNVAKRTLTVSPNGELHPSRFSEKDLLTVVDREYLFSYIDDPCLATYPLMQKLRAELVEHALKNGERERSANTSIFHKIAAFEEELKTILPKEVDNARIEIENGKSEIPNRIKECRSYPLYRFVREELGTSLLTGEKIKSPGEECYKVFNAICAGKLVDPLLECLKEWNGA 705          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.691e-82
Identity = 146/197 (74.11%), Postives = 165/197 (83.76%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVAL QA+DLRH+EEN++  VKNTVSQVAK+ LT G +GELHPSRF EKDLL+  DRE+VFAY DDPC  TYPLMQKLR+ LV HAL+NGENEK  N+SIF KIA FEEELK +LPKEVENAR +VENG P I NRI+ECRSYPLY+ VREELG   LTGEKV SPGEE DKVFTAMC+GK++DP+L CL  WNGA
Sbjct:  509 FLVALFQAVDLRHIEENVRLAVKNTVSQVAKRTLTTGVNGELHPSRFSEKDLLRVVDREYVFAYADDPCLTTYPLMQKLRETLVGHALDNGENEKDVNTSIFHKIAIFEEELKAILPKEVENARASVENGIPAISNRIEECRSYPLYKFVREELGTELLTGEKVRSPGEELDKVFTAMCEGKLVDPLLACLEAWNGA 705          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.208e-82
Identity = 147/197 (74.62%), Postives = 168/197 (85.28%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+GA+GELHP+RF EK+LL+  DRE++FAY DDPCS+ YPLMQKLRQVLV+ A+ NGE+EK  NSSIFQKI AFE+EL  VLPKEVE+ R   E+G+P I NRI ECRSYPLYRLVREELG   LTGEKV SPGEE DKVFTA+C G+IIDP+LECL+ WNGA
Sbjct:  503 YLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTMGANGELHPARFSEKELLRVVDREYLFAYADDPCSSNYPLMQKLRQVLVDQAMKNGESEKNVNSSIFQKIGAFEDELIAVLPKEVESVRAVFESGNPLIRNRITECRSYPLYRLVREELGTELLTGEKVRSPGEEIDKVFTAICNGQIIDPLLECLKSWNGA 699          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.853e-80
Identity = 140/197 (71.07%), Postives = 163/197 (82.74%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            FLVALCQA+DLRH+EEN++  VK TVSQVAKK L +G  G LHPSRF EK+LL+  DRE+VFAY DDPCSATYPLMQKLR+VLV HAL N  NEK A++SIF KI  FEEELK +LPKEVENAR +VENG+P IPN+I+ECRSYPLY+ VR ELG   LTGEKV SPGEE D+VF A+C+GK++DP+L CL  WNGA
Sbjct:  504 FLVALCQAVDLRHIEENVRLAVKKTVSQVAKKTLNIGVDGVLHPSRFSEKELLRVVDREYVFAYADDPCSATYPLMQKLREVLVSHALANSGNEKDASTSIFHKIGVFEEELKGILPKEVENARASVENGTPAIPNKIEECRSYPLYKFVRGELGTELLTGEKVRSPGEELDQVFNALCEGKLVDPLLACLEAWNGA 700          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.533e-75
Identity = 136/197 (69.04%), Postives = 159/197 (80.71%), Query Frame = -3
Query:  190 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 780
            +LVALCQA+DLRHLEENLK  VK+ VSQVAK+VLTVGA+GELHPSRF E+D+L+  DRE+VF+Y DDPCS TYPLMQKLR +LV+HAL + E E  + +S+F KI AFE ELK +LPKEVE  R   E G+  I NRIKECRSYPLYR VR+EL    LTGE V SPGEEFDKVF A+  GK+IDP+LECL+EWNGA
Sbjct:  506 YLVALCQAVDLRHLEENLKKAVKSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYPLMQKLRHILVDHALADPEREANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDELNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGA 702          
BLAST of CB293586 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 7.872e-72
Identity = 134/196 (68.37%), Postives = 152/196 (77.55%), Query Frame = -3
Query:  193 FLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGFNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 780
            FLVALCQAIDLRHLEEN+K+ VK+ V  VA+K L+   +G LH +RFCEKDLL   DRE VFAY DDPCSA YPLMQK+R VLVEHAL NGE E    +S+F K+A FE+EL+ VLPKEVE AR  VENG+    NRI ECRSYPLYR VR+ELG  +LTGEK  SPGEE DKVF AM QGK ID +LECL+EWNG
Sbjct:  499 FLVALCQAIDLRHLEENVKNAVKSCVKTVARKTLSTDNNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALANGEAEAHVETSVFAKLAMFEQELRAVLPKEVEAARSAVENGTAAQQNRIAECRSYPLYRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNG 694          
The following BLAST results are available for this feature:
BLAST of CB293586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PALY_BROFI6.208e-8576.14Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PALY_DIGLA8.108e-8576.14Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL4_POPKI2.359e-8477.16Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PAL1_IPOBA4.024e-8475.63Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL1_RUBID4.449e-8375.63Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PAL1_LITER1.691e-8274.11Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PAL1_SOLLC2.208e-8274.62Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL2_LITER7.853e-8071.07Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL4_ARATH1.533e-7569.04Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]
PALY_WHEAT7.872e-7268.37Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bd07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bd07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293586 ID=CB293586; Name=CB293586; organism=Citrus sinensis; type=EST; length=782bp
TTTTTTTTTTTTTTATAAAGGACAATAAGTCTTATAACCTTATATGAAAA
AACCAATAGAAGTGATTGAAATATTACAGATGAATTTGTACCACTGACTC
GCATGGGCAAATTCTATGAACACAAGAACACAAGGGATTGAAGACCGTGT
TATTAAACAAAATAAAAACAACTAACAAATTGGAAGAGGGGCGCCATTCC
ATTCCCTGAGACATTCCAGCATTGGATCAATGATCTTGCCCTGGCACATT
GCTGTAAACACTTTGTCAAATTCCTCGCCGGGCGATGTAACTTTTTCCCC
TGTTAGAAAATTAAACCCGAGCTCCTCCCTCACTAACCTGTACAAAGGGT
AAGACCTGCATTCTTTGATCCTGTTGGGAATTGTTGGACTTCCATTCTCA
ACAGTCTGCCTGGCGTTCTCAACTTCTTTGGGCAAAACGGTTTTCAATTC
CTCCTCAAAGGCTGCAATCTTCTGGAAGATTGAAGAGTTGGCAGTCTTCT
CGTTCTCTCCATTGTTCAGTGCGTGCTCAACAAGTACTTGCCTTAGCTTT
TGCATCAATGGATAGGTAGCACTGCAGGGGTCATCAATGTATGCAAAGAC
GTGTTCGCGATCAGCCGCTTTGAGCAGATCCTTCTCACAGAATCTTGATG
GATGAAGCTCTCCACTAGCACCGACGGTTAAGACTTTCTTAGCTACTTGG
CTGACAGTATTCTTGACTGTATGCTTCAAATTCTCCTCCAAATGTCTCAA
ATCAATAGCCTGGCAAAGCGCTACCAAGAATG
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