CB293596

Overview
NameCB293596
Unique NameCB293596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_PORYE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Porphyra yezoensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23
Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 2
Query:  152 VAVAVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIK-------PSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVRFAETI 640
            + +A+LDGWG     + N I +A TPT+DS  ++ P    LL A G  VGLP +  MGNSEVGH  +G GR+  Q     +L      I  +  FN ++        +    +LHLIGL S+GGVHS +D L  L+  A  +    + LH++TDGRD    S+  F + +
Sbjct:    9 IVLAILDGWGHTNIQQGNAIKIAKTPTIDSLIQAYPST--LLAASGQEVGLP-KGQMGNSEVGHTTIGGGRVIQQ-----ELVKIGNSIVDNSFFNNLELNEACEYANNNKASLHLIGLCSNGGVHSHIDHLLALIDLADSKQVTNLYLHLITDGRDTSSNSAKYFIKIV 170          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_COXBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23
Identity = 67/165 (40.61%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  152 VAVAVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVRFAETI 640
            + + +LDG+GE     +N I  A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++   E I
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI 173          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_COXBR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23
Identity = 67/165 (40.61%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  152 VAVAVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVRFAETI 640
            + + +LDG+GE     +N I  A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++   E I
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHHCGIKKIYLHAILDGRDTPPKSALLSIEKI 173          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_COXBN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23
Identity = 67/165 (40.61%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  152 VAVAVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVRFAETI 640
            + + +LDG+GE     +N I  A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++   E I
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI 173          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_BACCN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23
Identity = 68/152 (44.74%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  155 AVAVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDV 604
            A+ +LDG+G  +    N +  A  P  D +    P     L A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F N IK   E GT LHL GLLSDGGVHS +D +  LL+ A++ G +++ +H   DGRDV
Sbjct:    6 ALIILDGFGLREETYGNAVAQAKKPNFDRYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQNAIKHVKEKGTALHLFGLLSDGGVHSHIDHMFALLRLAAKEGVEKVYIHAFLDGRDV 154          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_THICR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thiomicrospira crunogena (strain XCL-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.649e-23
Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 2
Query:  140 RNNIVAVAVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT-----LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVRFAETI 640
            +N    + +LDGWG  +  ++N I  A TP  D+  K       L+   G AVGLP E  MGNSEVGH  LGAGR+  Q    +   +  G+ +++   N +  + +  +     +H++GLLSDGGVHS +  ++  +K A +RGAK + +HI TDGRD    S++++ E +
Sbjct:    8 KNRPTGLIILDGWGHREATQHNAIAQAHTPNWDNLLKDY--HHTLINTSGLAVGLP-EGQMGNSEVGHMNLGAGRVVYQELTRIQKDIDDGRFFEN---NALVKAIDAASNRDHKVHILGLLSDGGVHSHISHIKASIKMAHDRGAK-VYVHIFTDGRDTAPQSALQYIEEL 172          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_METMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanosarcina mazei GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.649e-23
Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 2
Query:  164 VLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDV 604
            +LDGWG  +  + N I  A TP +D  +K  P  +  L   G AVGLP +  MGNSEVGH  +GAGR+  Q    +++++ +G  +++    +  + +K      +LHL+GL+S GGVHS +  L  L+K A E+G K++ +H+  DGRDV
Sbjct:   18 ILDGWGYREEKEGNAILAASTPHLDRLQKERPSCF--LETSGEAVGLP-QGQMGNSEVGHLNIGAGRVVYQDLTKINVSIRNGDFFENPVLLDAISNVK--LNNSSLHLMGLVSYGGVHSHMTHLYALIKLAQEKGLKKVYIHVFLDGRDV 163          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_CHLAD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.649e-23
Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 2
Query:  134 LSRNNIVAVAVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVRFAETI 640
            ++R   V + ++DGWG   P   N   +ADTP +D +  + P  +  L A G  VGLP E  +GNSEVGH  +GAG I  Q    +  A+A G  + +  F     ++K       LHL+GL   GGVH+  D L  LL+ A  +  +R+ LH+  DGRDVL  S++ F +T+
Sbjct:    1 MTRPRPVVLIIMDGWGVAPPGPGNAADLADTPHVDEWMATCP--FTTLGASGLDVGLP-EGQIGNSEVGHLNIGAGFIVYQELTRISKAIADGDFFTNPAFLQAIEHVKQ--HNSALHLMGLFGPGGVHAHEDHLHALLELAHRQQVRRVYLHLFLDGRDVLPRSALGFLDTL 168          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI2_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.649e-23
Identity = 60/151 (39.74%), Postives = 89/151 (58.94%), Query Frame = 2
Query:  164 VLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDV 604
            +LDGWG  +  + N I  A+TP ++S     P  W  L   G AVGLP E  MGNSEVGH  +GAGR+  Q    ++L++ +G  +++    +  + +K      +LHL+GL+S GGVHS +  L  L+K A ++G K++ +H   DGRDV
Sbjct:   18 ILDGWGYREASEGNAILAAETPNLNSLLNEFP--WCFLECSGEAVGLP-EGQMGNSEVGHLNIGAGRVVYQDLTRINLSVRNGDFFENPVLLDAISNVK--LNDSSLHLMGLVSYGGVHSYMTHLYALIKLARDKGLKKVYIHAFLDGRDV 163          
BLAST of CB293596 vs. ExPASy Swiss-Prot
Match: GPMI_SYNY3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechocystis sp. (strain PCC 6803) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.225e-23
Identity = 66/166 (39.76%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  152 VAVAVLDGWGEFKPD-KYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVRFAETI 640
            V + +LDGWG ++PD + N I  A+TP MDS   + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    +  A+  G  + ++    +  +     G LHLIGL SDGGVHS +D L  L+  A  +G  ++ +H +TDGRD        F + I
Sbjct:    9 VVLVILDGWG-YRPDTRANAIAQANTPIMDSLIAAYPNT--LVNTSGKDVGLP-KGQMGNSEVGHLNLGAGRVVPQELVRISDAIEDGTFFDNQALIEVCQRVRDRRGKLHLIGLCSDGGVHSHIDHLLGLIDLAKLQGISQLCIHAITDGRDTPTNEGAHFVQQI 170          
The following BLAST results are available for this feature:
BLAST of CB293596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_PORYE2.794e-2337.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBU2.794e-2340.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBR2.794e-2340.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBN2.794e-2340.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACCN2.794e-2344.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THICR3.649e-2336.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METMA3.649e-2339.072,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLAD3.649e-2337.572,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METAC3.649e-2339.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNY36.225e-2339.762,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06be01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06be01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293596 ID=CB293596; Name=CB293596; organism=Citrus sinensis; type=EST; length=640bp
TGCCCTATGATTCTCTCTCTGTATAATATCTCTTGTTTGTTTCCTAGCTT
TCTACGGACGCGCGATTCGCCTTCAATCCAAAACTAATTAAGAGTGAAAG
ATGGATAACTGGAAATTAAAAGAGCATCCACAGCTGTCGAGGAATAACAT
TGTAGCCGTTGCGGTGTTGGATGGCTGGGGCGAGTTCAAGCCCGACAAGT
ATAACTGCATCCATGTCGCCGACACTCCCACCATGGACTCTTTCAAGAAG
TCTGCCCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGG
GCTTCCAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCAC
TCGGTGCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCT
CTGGCCTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCC
ATCTTTTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTG
GAGTACACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGT
GAGCGTGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGA
TGTTTTGGATGGTTCAAGCGTACGATTCGCAGAAACTATT
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