CB293694

Overview
NameCB293694
Unique NameCB293694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.437e-110
Identity = 194/231 (83.98%), Postives = 214/231 (92.64%), Query Frame = 3
Query:   81 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            MEGKEEDVRVGAN++ E QPIGT+AQ+   KDY EPPPAP F+PGELSSWSF+RAGIAEF+ATFLFLYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCLGAICGA VVKGFQ  QY+ LGGGAN ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 229          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.437e-110
Identity = 194/231 (83.98%), Postives = 214/231 (92.64%), Query Frame = 3
Query:   81 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            MEGKEEDVRVGAN++ E QPIGT+AQ+   KDY EPPPAP F+PGELSSWSF+RAGIAEF+ATFLFLYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCLGAICGA VVKGFQ  QY+ LGGGAN ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 229          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 394.815 bits (1013), Expect = 2.710e-109
Identity = 192/231 (83.12%), Postives = 212/231 (91.77%), Query Frame = 3
Query:   81 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            MEGKEEDV VGAN++ E QPIGTAAQT+  KDY EPPPAP F+PGEL SWSFYRAGIAEF+ATFLFLY+TVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FY++MQCLGAICGA VVKGFQ   Y+  GGGAN+++ GY+KG GLGAEIVGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPI
Sbjct:    1 MEGKEEDVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPI 230          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 385.956 bits (990), Expect = 1.259e-106
Identity = 191/233 (81.97%), Postives = 211/233 (90.56%), Query Frame = 3
Query:   81 MEGKEEDVRVGANRYRESQPIGTAAQTQDV-KDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQ-KSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            ME KE+DV +GAN++ E QP+G AAQ+QD  KDY EPPPAPLF+P EL+SWSFYRAGIAEF+ATFLFLYITVLTVMGV +  SKC TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM+MQ LGAICGA VVKGF+ K ++  L GGAN ++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPI
Sbjct:    1 MEAKEQDVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPI 233          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 9.022e-105
Identity = 190/231 (82.25%), Postives = 206/231 (89.18%), Query Frame = 3
Query:   81 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            MEGKEEDVR+GAN++ E   IGTAAQ  D KDY EPPPAPLF+PGEL SWSFYR GIAEFVATFLFLYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMI ALVYCTAGISG HINPAVTFGLFLARKLSLTRAVFY+IMQCLGAICG  VVKGFQ+  Y   GG  N+++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKR ARDSHVPILAPLPIGFAVFLVHLAT+ I
Sbjct:    1 MEGKEEDVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGI 230          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.625e-104
Identity = 187/228 (82.02%), Postives = 203/228 (89.04%), Query Frame = 3
Query:   90 KEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            +EEDVRVG +R+ E QPIGTAA     +DY+EPP APLF+  ELSSWSFYRAGIAEFVATFLFLY+TVLTVMGVSKS SKC TVGIQGIAWAFGGMIFALVYCTAG+SGGHINPAVTFGL LARKLSLTRAV+Y++MQCLGA+CGA VVK F  + YE  GGGAN +S GY+KGDGLGAE+VGTFVLVYTVFSATDAKR ARDSHVP LAPLPIGFAVFLVHLATIPI
Sbjct:   11 EEEDVRVGVDRFPERQPIGTAADDLG-RDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPI 237          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 4.210e-86
Identity = 154/214 (71.96%), Postives = 172/214 (80.37%), Query Frame = 3
Query:  132 SQPIGTAAQTQDVKDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            S+ +    +T   KDY +PPPAPL   GEL SWSFYRA IAEF+AT LFLY+TV TV+G  K    C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMI QCLGAICG   VK F K+ Y  LGGGAN ++ GYSKG  LGAEI+GTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGFAVF+VHLATIPI
Sbjct:    2 SKEVSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPI 215          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.600e-85
Identity = 158/209 (75.60%), Postives = 172/209 (82.30%), Query Frame = 3
Query:  171 KDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            KDYT+PPPAPL    EL+ WS YRA IAEF+AT LFLYITV TV+G        V+ + + CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+I QCLGAICG  +VKGFQ S Y   GGGAN LS GYSKG GLGAEI+GTFVLVYTVFSATD KRNARDSH+P+LAPLPIGFAVF+VHLATIPI
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPI 226          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.941e-84
Identity = 151/208 (72.60%), Postives = 168/208 (80.77%), Query Frame = 3
Query:  171 KDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSK-------SKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            KDY +PPPAPL  P EL+ WS YRA IAEF+AT LFLYITVLT++G  +         ++C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMI QC GAICGA + KGFQKS Y   GGG N +S GY+KG  LGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+
Sbjct:   17 KDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPV 224          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.147e-83
Identity = 148/204 (72.55%), Postives = 166/204 (81.37%), Query Frame = 3
Query:  162 QDVKDYTEPPPAPLFKPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPI 773
            Q  KDY +PPPAP F  GEL  WSF+RA IAEF+AT LFLYITV TV+G  K    C++VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMI QC GAICG  +VK F K  Y   GGGAN ++ GY+KG   GAE++GTFVLVYTVFSATD KR+ARDSHVPILAPLPIGFAVF+VHLATIPI
Sbjct:   14 QHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPI 217          
The following BLAST results are available for this feature:
BLAST of CB293694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
PIP11_VICFA1.437e-11083.98Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.437e-11083.98Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP15_ARATH2.710e-10983.12Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP2_PEA1.259e-10681.97Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE9.022e-10582.25Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE2.625e-10482.02Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP27_ARATH4.210e-8671.96Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP22_ORYSJ1.600e-8575.60Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE3.941e-8472.60Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP1_ATRCA1.147e-8372.55Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ca11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ca11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293694 ID=CB293694; Name=CB293694; organism=Citrus sinensis; type=EST; length=773bp
GCACGTAGGGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCT
ATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGA
TGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCG
CGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCG
CTCTTCAAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCAT
TGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAG
TGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAG
GGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCAC
TGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGT
TCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATG
CAGTGTTTAGGGGCCATATGCGGTGCGGCCGTTGTAAAGGGCTTTCAGAA
AAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCT
ACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTT
GTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGATTC
TCATGTTCCTATATTGGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGG
TGCACTTGGCAACAATTCCTATC
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