CB293694

Overview
NameCB293694
Unique NameCB293694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 118.627 bits (296), Expect = 3.749e-26
Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 3
Query:  216 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            E+    F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI  +A++ G   S  E    G N L++G + G GLG EI+GT  LV  V + TD +R          APL IG +V L HL  I
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAI 184          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 6.395e-26
Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 3
Query:  234 FYRAGIAEFVATFLFLYITVLTVMGVSKS-KSKCSTVGIQG---IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            F+RA +AEF+A  LF++I++ + +G     KS  +T  +Q    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI   A++ G   S  +    G N L+ G + G GLG EI+GT  LV  V + TD +R           PL IGF+V L HL  I
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGFSVALGHLLAI 186          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.091e-25
Identity = 74/182 (40.66%), Postives = 105/182 (57.69%), Query Frame = 3
Query:  234 FYRAGIAEFVATFLFLYITVLTVMGVSKS-KSKCSTVGIQG---IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            F+RA +AEF+A  LF++I++ + +G     KS  +T  +Q    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI    ++ G   S  +    G N L+ G + G GLG EI+GT  LV  V + TD +R  RD  +    PL IGF+V L HL  I
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAI 187          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.425e-25
Identity = 75/185 (40.54%), Postives = 100/185 (54.05%), Query Frame = 3
Query:  234 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQG----IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            F+RA +AEF+A  LF++I++ + +G         T G       ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI   A++ G   S    L G   G N L+ G   G GLG EI+GT  LV  V + TD +R          APL IGF+V L HL  I
Sbjct:   10 FWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSS----LPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGFSVALGHLLAI 186          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25
Identity = 72/186 (38.71%), Postives = 103/186 (55.38%), Query Frame = 3
Query:  216 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            E+    F+RA +AEF+A  LF++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI   A++ G   S  +    G N L+ G + G GLG EI+GT  LV  V + TD +R          APL IG +V L HL  I
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAI 184          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 5.413e-25
Identity = 71/182 (39.01%), Postives = 99/182 (54.40%), Query Frame = 3
Query:  234 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQG----IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            F+RA +AEF+A  LF++I++ + +G +       T G       ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAV Y+I QC+GAI   A++ G   S  +    G N L+ G + G GLG EI+GT  LV  V + TD +R           PL IG +V L HL  I
Sbjct:   10 FWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGLSVALGHLLAI 186          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25
Identity = 75/190 (39.47%), Postives = 104/190 (54.74%), Query Frame = 3
Query:  216 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVG----IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            E    +F+RA IAEF+A  LF++I++   +G +    +    TVG    I  ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+ +AV Y+I QCLGA+   A++ G   S  E    G N LS G S G GLG EI+ TF LV  V + TD +R+     V    PL IG +V L HL  I
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI-TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAI 188          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25
Identity = 72/182 (39.56%), Postives = 100/182 (54.95%), Query Frame = 3
Query:  234 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG--GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            F+RA +AEF+AT LF++I++ + +G         T     +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI   A++ G   S   + G   G N L+ G + G GLG EI+GT  LV  V + TD +R          APL IG +V L HL  I
Sbjct:   10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS---LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAI 184          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 5.985e-24
Identity = 72/183 (39.34%), Postives = 99/183 (54.10%), Query Frame = 3
Query:  234 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            F+RA +AEF+A  LF++I++ + +G         T     +  + AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y+I QC+GAI   A++ G   S    L G   G N L+ G + G GLG EI+GT  LV  V + TD +R          APL IG +V L HL  I
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS----LPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAI 184          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22
Identity = 68/180 (37.78%), Postives = 106/180 (58.89%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            +F++A  AEF+AT +F+ + V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+I QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAI 205          
The following BLAST results are available for this feature:
BLAST of CB293694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
AQP1_RAT3.749e-2639.25Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_BOVIN6.395e-2640.11Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP1.091e-2540.66Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG1.425e-2540.54Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.430e-2538.71Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_CANFA5.413e-2539.01Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQPA_RANES9.234e-2539.47Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_HUMAN9.234e-2539.56Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB5.985e-2439.34Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP4_MOUSE1.129e-2237.78Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ca11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ca11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293694 ID=CB293694; Name=CB293694; organism=Citrus sinensis; type=EST; length=773bp
GCACGTAGGGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCT
ATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGA
TGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCG
CGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCG
CTCTTCAAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCAT
TGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAG
TGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAG
GGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCAC
TGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGT
TCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATG
CAGTGTTTAGGGGCCATATGCGGTGCGGCCGTTGTAAAGGGCTTTCAGAA
AAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCT
ACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTT
GTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGATTC
TCATGTTCCTATATTGGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGG
TGCACTTGGCAACAATTCCTATC
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