CB293694

Overview
NameCB293694
Unique NameCB293694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.602e-22
Identity = 66/180 (36.67%), Postives = 105/180 (58.33%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            +F++A  AEF+A  +F+ ++V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAI 205          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.602e-22
Identity = 66/180 (36.67%), Postives = 106/180 (58.89%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            +F++A  AEF+A  +F+ +++ + +    ++ K   V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G  M+    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAI 205          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22
Identity = 66/180 (36.67%), Postives = 105/180 (58.33%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            +F++A  AEF+A  +F+ ++V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAI 208          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.780e-21
Identity = 65/180 (36.11%), Postives = 103/180 (57.22%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            +F++A  AEF+A  +F+ +++ + +     K     V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWG-GKENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAI 205          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.380e-20
Identity = 64/180 (35.56%), Postives = 104/180 (57.78%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            +F++A  AEF+A  +F+ +++ + +    ++ K   V +  I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    S G GL  E++ TF LV+T+F++ D+KR    + V     L IG +V + HL  I
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAI 205          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20
Identity = 65/181 (35.91%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  210 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAV 743
            P E +     +AG+AEF++TF+F++    + +  +K  +    +  G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R + Y+I Q LG+I  +A++     S     G     LS+G   G  L  EIV TF LVYTV+ +A D K+     ++ I+AP+ IGF V
Sbjct:   11 PQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIV 182          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20
Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            + +R  +AEF+ TF  + I + +  G +      +      IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY++ QC+GAI GAAV+K    S  E++GG G   ++ G S G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAI 189          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20
Identity = 65/186 (34.95%), Postives = 103/186 (55.38%), Query Frame = 3
Query:  216 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATI 767
            E+ S +F +A  AEF+AT +F++  + + +     K   +   +  I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL RAVFY++ Q +GAI GAA++ G   + Y        N L+   + G  + AE++ TF L   VFS+TD++R +     P+ +P L IG +V L HL  I
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL--APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGI 177          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 65/185 (35.14%), Postives = 99/185 (53.51%), Query Frame = 3
Query:  216 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATI 767
            E+ S +F +A  AEF+AT +F++  + + +     K   +   I  IA AFG  I  L      +SGGHINPA+T  L +  ++SL RAVFY++ Q +GAI GA ++ G             N L+   + G  +  E++ TF L   +FS+TD++R +     P+ +P L IG +V L HL  I
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARG-NLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGI 177          
BLAST of CB293694 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20
Identity = 61/180 (33.89%), Postives = 96/180 (53.33%), Query Frame = 3
Query:  231 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATI 767
            + +R  +AEF+ TF  + I + + MG     +   T     IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY++ QC+GAI GAA++K    S  +++GG G   +    + G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS--DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAI 190          
The following BLAST results are available for this feature:
BLAST of CB293694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
AQP4_RAT5.602e-2236.67Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_HUMAN5.602e-2236.67Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_NOTAL7.316e-2236.67Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_DIPME2.780e-2136.11Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_BOVIN1.380e-2035.56Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
TIP1_MEDTR2.354e-2035.91Probable aquaporin TIP-type OS=Medicago truncatula... [more]
AQP_ANOGA2.354e-2035.56Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP5_SHEEP2.354e-2034.95Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_PIG3.074e-2035.14Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_AEDAE8.944e-2033.89Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ca11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ca11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293694 ID=CB293694; Name=CB293694; organism=Citrus sinensis; type=EST; length=773bp
GCACGTAGGGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCT
ATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGA
TGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCG
CGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCG
CTCTTCAAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCAT
TGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAG
TGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAG
GGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCAC
TGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGT
TCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATG
CAGTGTTTAGGGGCCATATGCGGTGCGGCCGTTGTAAAGGGCTTTCAGAA
AAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCT
ACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTT
GTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGATTC
TCATGTTCCTATATTGGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGG
TGCACTTGGCAACAATTCCTATC
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