CB293703

Overview
NameCB293703
Unique NameCB293703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 2.766e-67
Identity = 125/163 (76.69%), Postives = 138/163 (84.66%), Query Frame = -3
Query:   41 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKPFG 529
            ARKVSLVRA++Y+VAQCLGAI GVGLVKAFQ +Y+ RYGGGAN LA GYS G GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARS+GAAVI   +KAW + W+FWVGPF+GAAIAAFYHQ+ILRAGA+K  G
Sbjct:  122 ARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALG 284          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 4.718e-67
Identity = 126/163 (77.30%), Postives = 133/163 (81.60%), Query Frame = -3
Query:   41 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKPFG 529
            ARKVSL+RAV+YMVAQCLGAI GVG VKAFQ S+Y  YGGGAN LADGY+TG GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARS GAAVI  K K WDD W+FWVGPFIGA IAAFYHQF+LRA   K  G
Sbjct:  115 ARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLG 277          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 1.793e-66
Identity = 125/160 (78.12%), Postives = 135/160 (84.38%), Query Frame = -3
Query:   50 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 529
            ARKVSLVRA++Y+VAQCLGAI GVGLVK FQ ++Y RYGGGANEL+ GYS G GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARSLGAAVI   DKAWDD W+FWVGPFIGAAIAA YHQ++LRA A K
Sbjct:  117 ARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASAAK 276          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 7.532e-65
Identity = 122/158 (77.22%), Postives = 131/158 (82.91%), Query Frame = -3
Query:   56 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGA 529
            ARKVSLVRA++Y+VAQCLGA+ GV LVK FQ S+Y RYGGGANELA GYS G GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARSLGAAV+    KAW DQW+FWVGPFIGAAIAA YHQ +LRA A
Sbjct:  116 ARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA 273          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.285e-64
Identity = 124/158 (78.48%), Postives = 130/158 (82.28%), Query Frame = -3
Query:   56 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGA 529
            ARKVSLVRA++YM AQCLGAI GV LVK FQ S Y RYGGGANELA GYSTG GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARSLG AV+   +KAW DQW+FWVGPFIGAAIAA YHQ ILRA A
Sbjct:  119 ARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRASA 276          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.191e-64
Identity = 123/160 (76.88%), Postives = 133/160 (83.12%), Query Frame = -3
Query:   50 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 529
            ARKVSLVRAV+Y+VAQ LGAI GVGLVK FQ ++Y RYGGGANEL+DGYS G GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARSLGAAVI  + KAW D W+FWVGP IGAAIAA YHQ++LRA A K
Sbjct:  122 ARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK 281          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.088e-63
Identity = 116/162 (71.60%), Postives = 130/162 (80.25%), Query Frame = -3
Query:   41 RKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKPFG 526
            RKVSLVRA++YM+AQC GAI G GL K FQKS+Y RYGGG N ++DGY+ G  L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARS G AVI   DKAWDDQW++WVGPF+GAA+AA YHQ+ILR  A+K  G
Sbjct:  120 RKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALG 281          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.164e-63
Identity = 120/158 (75.95%), Postives = 129/158 (81.65%), Query Frame = -3
Query:   56 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGA 529
            ARKVSLVRA++YM AQ LGAI GV LVK FQ  +Y RYGGGANE++ GYSTG GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLA          PARSLGAAV+    KAW DQW+FWVGPFIGAAIAA YHQ +LRA A
Sbjct:  121 ARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA 278          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 7.050e-63
Identity = 122/160 (76.25%), Postives = 129/160 (80.62%), Query Frame = -3
Query:   50 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 529
            ARKVSL RAV YMVAQCLGAI GVGLVKAF  + Y R GGGAN +ADGYSTG  L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLA          PARS GAAVI   +KAWDD W+FWVGPF+GA  AA YHQ+ILRA A+K
Sbjct:  108 ARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIK 267          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 9.207e-63
Identity = 120/163 (73.62%), Postives = 130/163 (79.75%), Query Frame = -3
Query:   41 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKPFG 529
            ARKVSLVRA+ YM+AQCLGAI GVG VKAF K+ Y   GGGAN +ADGYS G  L AEIIGTFVLVYTVFSATDPKRSARDSH+PVLAPLPIGFAVFMVHLA          PARS GAAVI   +KAWDDQW+FWVGPF+GA  AA YHQ+ILRA A+K  G
Sbjct:  110 ARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKALG 272          
The following BLAST results are available for this feature:
BLAST of CB293703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PIP21_ORYSJ2.766e-6776.69Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP23_ARATH4.718e-6777.30Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP25_MAIZE1.793e-6678.13Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP25_ORYSJ7.532e-6577.22Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP24_ORYSJ1.285e-6478.48Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ORYSJ2.191e-6476.88Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE1.088e-6371.60Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP26_MAIZE3.164e-6375.95Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP28_ARATH7.050e-6376.25Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH9.207e-6373.62Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06cb05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cb05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293703 ID=CB293703; Name=CB293703; organism=Citrus sinensis; type=EST; length=531bp
GAAGAAACTAAAATCGAACACGGGATTGGCTCCTGAATGAACCAAAAGGC
TTGACAGCTCCAGCTCTCAAGATGAATTGGTGGTAAAAAGCTGCAATTGC
TGCACCAATGAAGGGTCCAACCCAGAAAAGCCATTGATCATCCCAAGCCT
TGTCCTTGGTGGAAATAACAGCGGCCCCGAGACTCCTTGCTGGGGTAATG
CCAGTGCCAGTGATTGGGATTGTGGCCAAGTGTACCATGAACACAGCAAA
TCCAATGGGGAGCGGTGCCAAAACGGGAACGTGGGAGTCTCTGGCGCTTC
TCTTGGGATCAGTGGCCGAGAATACAGTGTAAACCAAGACAAAGGTGCCG
ATGATCTCGGCGGTCAATCCAACGCCGGTGCTGTACCCATCGGCCAGCTC
GTTGGCCCCACCTCCGTACCTTGTGTAGTAAGATTTTTGGAAAGCCTTGA
CCAACCCAACACCGGAGATAGCACCAAGGCACTGCGCCACCATGTACATC
ACAGCACGGACCAACGACACCTTGCGGGCCA
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