CB293703

Overview
NameCB293703
Unique NameCB293703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = -3
Query:   68 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 520
            VS +RAV Y+ AQ LGA++G  L+         R     N L +  + G  +T E+  T  LV  +F +TD +R  +  H      L IGF+V + HL           PARSL  A+++ K   +DD W+FW+GP +GA +A+  + ++L
Sbjct:   81 VSFLRAVFYVAAQLLGAVAGAALLHEITPPAI-RGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.303e-16
Identity = 53/150 (35.33%), Postives = 78/150 (52.00%), Query Frame = -3
Query:   74 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIA-AFYHQF 520
            +S+++   Y+V+QC+GAI+G  L+KA   S     G G   +    + G G+  E + TF+LV+ V    D +RS     +   APL IG ++   HL+          PARS G AV+      W DQW++WVGP +G  +A A Y  F
Sbjct:   95 ISILKGAFYIVSQCVGAIAGAALIKAATPSDVIG-GLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRS----DIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLF 236          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.701e-16
Identity = 56/160 (35.00%), Postives = 84/160 (52.50%), Query Frame = -3
Query:   47 KVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKP 523
            ++S++RA+ Y VAQ +GAI    L++                +A G S   GL  EII TF LVY V+S A DPKR +    + ++APL IG  V    L           PAR+ G A++  +   W + W++WVGPFIG A+AA  +++++     +P
Sbjct:  105 RISVIRAIYYWVAQLIGAILACLLLRLATNGLRPV----GFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMIIPSVNEP 253          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.222e-16
Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = -3
Query:   68 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 520
            VS++RA  Y+ AQ LGA++G  L+     +   R     N L++  + G  +T E+  T  LV  +F++TD +R       P    L IGF+V + HL           PARSL  AV++ K   +DD W+FW+GP +GA + +  + ++L
Sbjct:   81 VSVLRAAFYVAAQLLGAVAGAALLHEITPADI-RGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.950e-16
Identity = 53/153 (34.64%), Postives = 83/153 (54.25%), Query Frame = -3
Query:   68 KVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 523
            ++SL+RA+ Y+ AQ +GAI+G G++         R     N L++  + G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL           PARS G AV+  +       W+FWVGP +GA +AA  + ++L
Sbjct:   81 QISLLRAIFYVAAQLVGAIAGAGILYWLAPGN-ARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSP--SHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16
Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = -3
Query:   68 KVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 523
            ++SL+RAV Y+ AQ +GAI+G G++  +      R     N L +  + G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL           PARS G AV+  +       W+FWVGP +GA +AA  + ++L
Sbjct:   81 QISLLRAVFYVAAQLVGAIAGAGILY-WLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSP--SHWVFWVGPIVGAMLAAILYFYLL 225          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = -3
Query:   68 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 520
            VS +RAV Y+ AQ LGA++G  L+         R     N L +  + G  +T E+  T  LV  +F++TD +R       P L+   IGF+V + HL           PARSL  A+++ K   +DD W+FW+GP +GA +A+  + ++L
Sbjct:   81 VSFLRAVFYVAAQLLGAVAGAALLHEITPPAI-RGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG-TPALS---IGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.103e-15
Identity = 55/153 (35.95%), Postives = 80/153 (52.29%), Query Frame = -3
Query:   68 KVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 523
            +V+ +RA+ Y +AQ LGAI    L++                LA G     GL  EII TF LVY V+S   DPKR +    + ++APL IG  V    L           PAR+ G A++  +   W D W++WVGPFIG+A+AA  +++++
Sbjct:  105 RVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPV----GFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.103e-15
Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = -3
Query:   71 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 520
            ++L+R ++Y++AQ LG+I    L+     S    +G     L++G   G  L  EI+ TF LVYTV++ A DPK+     ++ ++AP+ IGF V    L           PA S G AV+S    +W + W++W GP IG  IA   ++ +
Sbjct:   98 ITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSW---SWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of CB293703 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.440e-15
Identity = 57/151 (37.75%), Postives = 80/151 (52.98%), Query Frame = -3
Query:   71 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLTAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLAXXXXXXXXXXPARSLGAAVISTKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 520
            ++L+RA++Y +AQ LGA+    L+K       T     A  L+ G +    +  EI+ TF LVYTV++ A DPK+      + ++APL IG  V    L           PA S G AV+S     W + W++WVGPFIGAAIAA  +  I
Sbjct:   98 ITLLRAILYWIAQLLGAVVACLLLKVSTGGMET----AAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKG----DIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSW---IWTNHWVYWVGPFIGAAIAAIVYDTI 237          
The following BLAST results are available for this feature:
BLAST of CB293703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
AQP2_SHEEP9.975e-1734.44Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP_AEDAE1.303e-1635.33Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP32_ARATH1.701e-1635.00Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP2_HUMAN2.222e-1633.77Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP5_MOUSE4.950e-1634.64Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_RAT6.465e-1635.29Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP2_BOVIN6.465e-1634.44Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP31_ARATH1.103e-1535.95Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP1_MEDTR1.103e-1533.77Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP13_ARATH1.440e-1537.75Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06cb05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cb05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293703 ID=CB293703; Name=CB293703; organism=Citrus sinensis; type=EST; length=531bp
GAAGAAACTAAAATCGAACACGGGATTGGCTCCTGAATGAACCAAAAGGC
TTGACAGCTCCAGCTCTCAAGATGAATTGGTGGTAAAAAGCTGCAATTGC
TGCACCAATGAAGGGTCCAACCCAGAAAAGCCATTGATCATCCCAAGCCT
TGTCCTTGGTGGAAATAACAGCGGCCCCGAGACTCCTTGCTGGGGTAATG
CCAGTGCCAGTGATTGGGATTGTGGCCAAGTGTACCATGAACACAGCAAA
TCCAATGGGGAGCGGTGCCAAAACGGGAACGTGGGAGTCTCTGGCGCTTC
TCTTGGGATCAGTGGCCGAGAATACAGTGTAAACCAAGACAAAGGTGCCG
ATGATCTCGGCGGTCAATCCAACGCCGGTGCTGTACCCATCGGCCAGCTC
GTTGGCCCCACCTCCGTACCTTGTGTAGTAAGATTTTTGGAAAGCCTTGA
CCAACCCAACACCGGAGATAGCACCAAGGCACTGCGCCACCATGTACATC
ACAGCACGGACCAACGACACCTTGCGGGCCA
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