CB293706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP1_SPIOL (Acyl carrier protein 1, chloroplastic OS=Spinacia oleracea GN=ACL1.1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20 Identity = 62/136 (45.59%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 111 SVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKS 518 S T T S S K +QG SFP+LR ++ R AAK ET+DKVC IVK++LAL AD T +S+F+ LGADSLDTVEIVM L AQ IST+Q AAD+IE L+E K+ Sbjct: 5 SATTTVRVQPSSSSLHKLSQGNGRCSSIVCLDWGKSSFPTLR--TSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKKA 138
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP2_ARATH (Acyl carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=ACL1.2 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 56/102 (54.90%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 216 KSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKS 518 +S S +R P R VSCAAKPETVDKVC +V+KQL+L T +KFAALGADSLDTVEIVMGL AQ+I+TV+ AA LIE+L+ K+ Sbjct: 34 RSSLSFNLRQLPTRLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLFEKA 135
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP1_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A1 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 240 RSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 RS P R VSCAAKPETV+KV +IVKKQL+L D E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LI++L++ K Sbjct: 41 RSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQNVVAETKFADLGADSLDTVEIVMGLEEEFHIEMAEEKAQKITTVEEAAELIDELVQAK 133
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP3_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A3 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 228 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 +LR R VSCAAKPET++KV +IVKKQL+L D E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LIE+L+ K Sbjct: 38 NLRRSIPTRLSVSCAAKPETIEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELVLLK 133
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP3_ARATH (Acyl carrier protein 3, chloroplastic OS=Arabidopsis thaliana GN=ACL1.3 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19 Identity = 54/98 (55.10%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 228 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKS 518 S +R P R V CAAKPETVDKVC +V+KQL+L T +KFAALGADSLDTVEIVMGL AQ+I+TV+ AA LIE+L+ K+ Sbjct: 38 SFNLRQLPTRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLLEKA 135
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP1_ARATH (Acyl carrier protein 1, chloroplastic OS=Arabidopsis thaliana GN=ACP-1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19 Identity = 60/136 (44.12%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 108 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 ASV+ ++C+ + SF++ +S PS R+ VSCAAK ET++KV IVKKQL+L D E+KFA LGADSLDTVEIVMGL AQ I+TV+ AA+LIE+LI K Sbjct: 7 ASVSLQTSCLATTRISFQKPALISNHGKTNLSFNLRRSIPSRRLS------VSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIATVEQAAELIEELINEK 136
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP2_SPIOL (Acyl carrier protein 2, chloroplastic OS=Spinacia oleracea GN=ACL1.2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 62/138 (44.93%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 105 MASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPR-FRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 MAS+TG+S S C+ Q+ + P + PR VSCAAKPE V KV IVK QLAL D TGE+KF+ +GADSLDTVEIVM L +AQTI+T+Q+AAD+IE L + K Sbjct: 1 MASITGSSV---SFKCAPLQSSFNSKNYALKSSVTFWRRTPVM-----PRGLSVSCAAKPEMVTKVSDIVKSQLALAEDAKVTGETKFSEIGADSLDTVEIVMKLEEEFGVTVEEENAQTITTIQEAADMIEALQQNK 130
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP5_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.C1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 50/91 (54.95%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 243 SAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 S R +SCAAK ETV+KV +IVKKQL+L D E+KF LGADSLDTVEIVMGL AQ I+TV+ AA+LIE+L++ K Sbjct: 43 SRTRLSISCAAKQETVEKVSEIVKKQLSLKDDQQVVAETKFVDLGADSLDTVEIVMGLEEEFGIQMAEEKAQKIATVEQAAELIEELMQAK 133 The following BLAST results are available for this feature:
BLAST of CB293706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293706 ID=CB293706; Name=CB293706; organism=Citrus sinensis; type=EST; length=709bpback to top |